Gene : Medtr6g048300 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR13696:SF1 - SEPTUM SITE-DETERMINING PROTEIN MIND HOMOLOG, CHLOROPLASTIC-RELATED Description:  septum site determining protein MinD, putative
Genomic Order:  2080 Name:  ? Medtr6g048300
Secondary Identifier:  ? PAC:31105689
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g048300 0.5kb upstream 0.5kb upstream 1885 true chr6: 17428195-17430079 Medicago truncatula
Medtr6g048300 0.5kb upstream 0.5kb upstream 500 false chr6: 17428195-17428694 Medicago truncatula
Medtr6g048300 0.5kb downstream 0.5kb downstream 1885 true chr6: 17428695-17430579 Medicago truncatula
Medtr6g048300 0.5kb downstream 0.5kb downstream 500 false chr6: 17430080-17430579 Medicago truncatula
Medtr6g048300 1.0kb upstream 1.0kb upstream 2385 true chr6: 17427695-17430079 Medicago truncatula
Medtr6g048300 1.0kb upstream 1.0kb upstream 1000 false chr6: 17427695-17428694 Medicago truncatula
Medtr6g048300 1.0kb downstream 1.0kb downstream 2385 true chr6: 17428695-17431079 Medicago truncatula
Medtr6g048300 1.0kb downstream 1.0kb downstream 1000 false chr6: 17430080-17431079 Medicago truncatula
Medtr6g048300 2.0kb upstream 2.0kb upstream 3385 true chr6: 17426695-17430079 Medicago truncatula
Medtr6g048300 2.0kb upstream 2.0kb upstream 2000 false chr6: 17426695-17428694 Medicago truncatula
Medtr6g048300 2.0kb downstream 2.0kb downstream 3385 true chr6: 17428695-17432079 Medicago truncatula
Medtr6g048300 2.0kb downstream 2.0kb downstream 2000 false chr6: 17430080-17432079 Medicago truncatula
Medtr6g048300 5.0kb upstream 5.0kb upstream 6385 true chr6: 17423695-17430079 Medicago truncatula
Medtr6g048300 5.0kb upstream 5.0kb upstream 5000 false chr6: 17423695-17428694 Medicago truncatula
Medtr6g048300 5.0kb downstream 5.0kb downstream 6385 true chr6: 17428695-17435079 Medicago truncatula
Medtr6g048300 5.0kb downstream 5.0kb downstream 5000 false chr6: 17430080-17435079 Medicago truncatula
Medtr6g048300 10.0kb upstream 10.0kb upstream 11385 true chr6: 17418695-17430079 Medicago truncatula
Medtr6g048300 10.0kb upstream 10.0kb upstream 10000 false chr6: 17418695-17428694 Medicago truncatula
Medtr6g048300 10.0kb downstream 10.0kb downstream 11385 true chr6: 17428695-17440079 Medicago truncatula
Medtr6g048300 10.0kb downstream 10.0kb downstream 10000 false chr6: 17430080-17440079 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309065 5265 Fabidae View MSA
124063209 5270 Rosid View MSA
123737369 5271 Pentapetalae View MSA
122788241 5272 Eudicot View MSA
122045379 5273 Angiosperm View MSA
121344611 5274 Embryophyte View MSA
123425268 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.54        
cufflinks 2.699        
cufflinks 1.494        
cufflinks 4.855       High
cufflinks 5.697       High
cufflinks 1.281        
cufflinks 1.347        
cufflinks 1.523        
cufflinks 3.661        

0 Strain