Gene : Medtr6g052360 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR13343:SF13 - PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN-LIKE PROTEIN Description:  PPR superfamily protein, putative
Genomic Order:  2171 Name:  ? Medtr6g052360
Secondary Identifier:  ? PAC:31102685
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g052360 0.5kb upstream 0.5kb upstream 8485 true chr6: 18281384-18289868 Medicago truncatula
Medtr6g052360 0.5kb upstream 0.5kb upstream 500 false chr6: 18289369-18289868 Medicago truncatula
Medtr6g052360 0.5kb downstream 0.5kb downstream 8485 true chr6: 18280884-18289368 Medicago truncatula
Medtr6g052360 0.5kb downstream 0.5kb downstream 500 false chr6: 18280884-18281383 Medicago truncatula
Medtr6g052360 1.0kb upstream 1.0kb upstream 8985 true chr6: 18281384-18290368 Medicago truncatula
Medtr6g052360 1.0kb upstream 1.0kb upstream 1000 false chr6: 18289369-18290368 Medicago truncatula
Medtr6g052360 1.0kb downstream 1.0kb downstream 8985 true chr6: 18280384-18289368 Medicago truncatula
Medtr6g052360 1.0kb downstream 1.0kb downstream 1000 false chr6: 18280384-18281383 Medicago truncatula
Medtr6g052360 2.0kb upstream 2.0kb upstream 9985 true chr6: 18281384-18291368 Medicago truncatula
Medtr6g052360 2.0kb upstream 2.0kb upstream 2000 false chr6: 18289369-18291368 Medicago truncatula
Medtr6g052360 2.0kb downstream 2.0kb downstream 9985 true chr6: 18279384-18289368 Medicago truncatula
Medtr6g052360 2.0kb downstream 2.0kb downstream 2000 false chr6: 18279384-18281383 Medicago truncatula
Medtr6g052360 5.0kb upstream 5.0kb upstream 12985 true chr6: 18281384-18294368 Medicago truncatula
Medtr6g052360 5.0kb upstream 5.0kb upstream 5000 false chr6: 18289369-18294368 Medicago truncatula
Medtr6g052360 5.0kb downstream 5.0kb downstream 12985 true chr6: 18276384-18289368 Medicago truncatula
Medtr6g052360 5.0kb downstream 5.0kb downstream 5000 false chr6: 18276384-18281383 Medicago truncatula
Medtr6g052360 10.0kb upstream 10.0kb upstream 17985 true chr6: 18281384-18299368 Medicago truncatula
Medtr6g052360 10.0kb upstream 10.0kb upstream 10000 false chr6: 18289369-18299368 Medicago truncatula
Medtr6g052360 10.0kb downstream 10.0kb downstream 17985 true chr6: 18271384-18289368 Medicago truncatula
Medtr6g052360 10.0kb downstream 10.0kb downstream 10000 false chr6: 18271384-18281383 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307064 5265 Fabidae View MSA
124066138 5270 Rosid View MSA
123741710 5271 Pentapetalae View MSA
122789997 5272 Eudicot View MSA
122050575 5273 Angiosperm View MSA
121348228 5274 Embryophyte View MSA
123380781 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.397        
cufflinks 5.758        
cufflinks 5.336        
cufflinks 0.618        
cufflinks 5.319        
cufflinks 0.591       Low
cufflinks 0.899        
cufflinks 5.798        
cufflinks 0.41       Low

0 Strain