Gene : Medtr6g051780 M. truncatula Mt4.0v1
Defline:  (1 of 2) PF11947 - Protein of unknown function (DUF3464) (DUF3464) Description:  transmembrane protein, putative
Genomic Order:  2137 Name:  ? Medtr6g051780
Secondary Identifier:  ? PAC:31105414
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g051780 0.5kb upstream 0.5kb upstream 1355 true chr6: 18029665-18031019 Medicago truncatula
Medtr6g051780 0.5kb upstream 0.5kb upstream 500 false chr6: 18030520-18031019 Medicago truncatula
Medtr6g051780 0.5kb downstream 0.5kb downstream 1355 true chr6: 18029165-18030519 Medicago truncatula
Medtr6g051780 0.5kb downstream 0.5kb downstream 500 false chr6: 18029165-18029664 Medicago truncatula
Medtr6g051780 1.0kb upstream 1.0kb upstream 1855 true chr6: 18029665-18031519 Medicago truncatula
Medtr6g051780 1.0kb upstream 1.0kb upstream 1000 false chr6: 18030520-18031519 Medicago truncatula
Medtr6g051780 1.0kb downstream 1.0kb downstream 1855 true chr6: 18028665-18030519 Medicago truncatula
Medtr6g051780 1.0kb downstream 1.0kb downstream 1000 false chr6: 18028665-18029664 Medicago truncatula
Medtr6g051780 2.0kb upstream 2.0kb upstream 2855 true chr6: 18029665-18032519 Medicago truncatula
Medtr6g051780 2.0kb upstream 2.0kb upstream 2000 false chr6: 18030520-18032519 Medicago truncatula
Medtr6g051780 2.0kb downstream 2.0kb downstream 2855 true chr6: 18027665-18030519 Medicago truncatula
Medtr6g051780 2.0kb downstream 2.0kb downstream 2000 false chr6: 18027665-18029664 Medicago truncatula
Medtr6g051780 5.0kb upstream 5.0kb upstream 5855 true chr6: 18029665-18035519 Medicago truncatula
Medtr6g051780 5.0kb upstream 5.0kb upstream 5000 false chr6: 18030520-18035519 Medicago truncatula
Medtr6g051780 5.0kb downstream 5.0kb downstream 5855 true chr6: 18024665-18030519 Medicago truncatula
Medtr6g051780 5.0kb downstream 5.0kb downstream 5000 false chr6: 18024665-18029664 Medicago truncatula
Medtr6g051780 10.0kb upstream 10.0kb upstream 10855 true chr6: 18029665-18040519 Medicago truncatula
Medtr6g051780 10.0kb upstream 10.0kb upstream 10000 false chr6: 18030520-18040519 Medicago truncatula
Medtr6g051780 10.0kb downstream 10.0kb downstream 10855 true chr6: 18019665-18030519 Medicago truncatula
Medtr6g051780 10.0kb downstream 10.0kb downstream 10000 false chr6: 18019665-18029664 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308704 5265 Fabidae View MSA
124067243 5270 Rosid View MSA
123738639 5271 Pentapetalae View MSA
122792645 5272 Eudicot View MSA
122046649 5273 Angiosperm View MSA
121348094 5274 Embryophyte View MSA
123428537 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.064     Low Low
cufflinks 76.153     High  
cufflinks 96.221     High  
cufflinks 0.057     Low Low
cufflinks 197.377     High High
cufflinks 0.5        
cufflinks 0.826        
cufflinks 101.764     High  
cufflinks 0.12        

0 Strain