Gene : Medtr6g049320 M. truncatula Mt4.0v1
Defline:  (1 of 17) PTHR22814:SF129 - COPPER TRANSPORT FAMILY PROTEIN-RELATED Description:  heavy metal-associated domain protein
Genomic Order:  2120 Name:  ? Medtr6g049320
Secondary Identifier:  ? PAC:31103447
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g049320 0.5kb upstream 0.5kb upstream 1538 true chr6: 17871919-17873456 Medicago truncatula
Medtr6g049320 0.5kb upstream 0.5kb upstream 500 false chr6: 17872957-17873456 Medicago truncatula
Medtr6g049320 0.5kb downstream 0.5kb downstream 1538 true chr6: 17871419-17872956 Medicago truncatula
Medtr6g049320 0.5kb downstream 0.5kb downstream 500 false chr6: 17871419-17871918 Medicago truncatula
Medtr6g049320 1.0kb upstream 1.0kb upstream 2038 true chr6: 17871919-17873956 Medicago truncatula
Medtr6g049320 1.0kb upstream 1.0kb upstream 1000 false chr6: 17872957-17873956 Medicago truncatula
Medtr6g049320 1.0kb downstream 1.0kb downstream 2038 true chr6: 17870919-17872956 Medicago truncatula
Medtr6g049320 1.0kb downstream 1.0kb downstream 1000 false chr6: 17870919-17871918 Medicago truncatula
Medtr6g049320 2.0kb upstream 2.0kb upstream 3038 true chr6: 17871919-17874956 Medicago truncatula
Medtr6g049320 2.0kb upstream 2.0kb upstream 2000 false chr6: 17872957-17874956 Medicago truncatula
Medtr6g049320 2.0kb downstream 2.0kb downstream 3038 true chr6: 17869919-17872956 Medicago truncatula
Medtr6g049320 2.0kb downstream 2.0kb downstream 2000 false chr6: 17869919-17871918 Medicago truncatula
Medtr6g049320 5.0kb upstream 5.0kb upstream 6038 true chr6: 17871919-17877956 Medicago truncatula
Medtr6g049320 5.0kb upstream 5.0kb upstream 5000 false chr6: 17872957-17877956 Medicago truncatula
Medtr6g049320 5.0kb downstream 5.0kb downstream 6038 true chr6: 17866919-17872956 Medicago truncatula
Medtr6g049320 5.0kb downstream 5.0kb downstream 5000 false chr6: 17866919-17871918 Medicago truncatula
Medtr6g049320 10.0kb upstream 10.0kb upstream 11038 true chr6: 17871919-17882956 Medicago truncatula
Medtr6g049320 10.0kb upstream 10.0kb upstream 10000 false chr6: 17872957-17882956 Medicago truncatula
Medtr6g049320 10.0kb downstream 10.0kb downstream 11038 true chr6: 17861919-17872956 Medicago truncatula
Medtr6g049320 10.0kb downstream 10.0kb downstream 10000 false chr6: 17861919-17871918 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298597 5265 Fabidae View MSA
124072200 5270 Rosid View MSA
123751300 5271 Pentapetalae View MSA
122793053 5272 Eudicot View MSA
122051560 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.261     High  
cufflinks 46.115     High  
cufflinks 57.747     High  
cufflinks 4.076       Low
cufflinks 63.83     High High
cufflinks 13.19     High  
cufflinks 28.58     High  
cufflinks 38.199     High  
cufflinks 19.385     High  

0 Strain