Gene : Medtr6g049280 M. truncatula Mt4.0v1
Defline:  (1 of 17) PTHR22814:SF129 - COPPER TRANSPORT FAMILY PROTEIN-RELATED Description:  heavy metal-associated domain protein
Genomic Order:  2118 Name:  ? Medtr6g049280
Secondary Identifier:  ? PAC:31102085
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g049280 0.5kb upstream 0.5kb upstream 1711 true chr6: 17861166-17862876 Medicago truncatula
Medtr6g049280 0.5kb upstream 0.5kb upstream 500 false chr6: 17862377-17862876 Medicago truncatula
Medtr6g049280 0.5kb downstream 0.5kb downstream 1711 true chr6: 17860666-17862376 Medicago truncatula
Medtr6g049280 0.5kb downstream 0.5kb downstream 500 false chr6: 17860666-17861165 Medicago truncatula
Medtr6g049280 1.0kb upstream 1.0kb upstream 2211 true chr6: 17861166-17863376 Medicago truncatula
Medtr6g049280 1.0kb upstream 1.0kb upstream 1000 false chr6: 17862377-17863376 Medicago truncatula
Medtr6g049280 1.0kb downstream 1.0kb downstream 2211 true chr6: 17860166-17862376 Medicago truncatula
Medtr6g049280 1.0kb downstream 1.0kb downstream 1000 false chr6: 17860166-17861165 Medicago truncatula
Medtr6g049280 2.0kb upstream 2.0kb upstream 3211 true chr6: 17861166-17864376 Medicago truncatula
Medtr6g049280 2.0kb upstream 2.0kb upstream 2000 false chr6: 17862377-17864376 Medicago truncatula
Medtr6g049280 2.0kb downstream 2.0kb downstream 3211 true chr6: 17859166-17862376 Medicago truncatula
Medtr6g049280 2.0kb downstream 2.0kb downstream 2000 false chr6: 17859166-17861165 Medicago truncatula
Medtr6g049280 5.0kb upstream 5.0kb upstream 6211 true chr6: 17861166-17867376 Medicago truncatula
Medtr6g049280 5.0kb upstream 5.0kb upstream 5000 false chr6: 17862377-17867376 Medicago truncatula
Medtr6g049280 5.0kb downstream 5.0kb downstream 6211 true chr6: 17856166-17862376 Medicago truncatula
Medtr6g049280 5.0kb downstream 5.0kb downstream 5000 false chr6: 17856166-17861165 Medicago truncatula
Medtr6g049280 10.0kb upstream 10.0kb upstream 11211 true chr6: 17861166-17872376 Medicago truncatula
Medtr6g049280 10.0kb upstream 10.0kb upstream 10000 false chr6: 17862377-17872376 Medicago truncatula
Medtr6g049280 10.0kb downstream 10.0kb downstream 11211 true chr6: 17851166-17862376 Medicago truncatula
Medtr6g049280 10.0kb downstream 10.0kb downstream 10000 false chr6: 17851166-17861165 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298597 5265 Fabidae View MSA
124072200 5270 Rosid View MSA
123751300 5271 Pentapetalae View MSA
122793053 5272 Eudicot View MSA
122051560 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.371     High  
cufflinks 38.624     High  
cufflinks 59.16     High High
cufflinks 3.151       Low
cufflinks 58.948     High High
cufflinks 8.563        
cufflinks 22.125     High  
cufflinks 35.769     High  
cufflinks 13.023     High  

0 Strain