Gene : Medtr6g053730 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10114 - 60S RIBOSOMAL PROTEIN L36 Description:  60S ribosomal protein L36
Genomic Order:  2269 Name:  ? Medtr6g053730
Secondary Identifier:  ? PAC:31104013
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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g053730 0.5kb upstream 0.5kb upstream 3145 true chr6: 19374817-19377961 Medicago truncatula
Medtr6g053730 0.5kb upstream 0.5kb upstream 500 false chr6: 19374817-19375316 Medicago truncatula
Medtr6g053730 0.5kb downstream 0.5kb downstream 3145 true chr6: 19375317-19378461 Medicago truncatula
Medtr6g053730 0.5kb downstream 0.5kb downstream 500 false chr6: 19377962-19378461 Medicago truncatula
Medtr6g053730 1.0kb upstream 1.0kb upstream 3645 true chr6: 19374317-19377961 Medicago truncatula
Medtr6g053730 1.0kb upstream 1.0kb upstream 1000 false chr6: 19374317-19375316 Medicago truncatula
Medtr6g053730 1.0kb downstream 1.0kb downstream 3645 true chr6: 19375317-19378961 Medicago truncatula
Medtr6g053730 1.0kb downstream 1.0kb downstream 1000 false chr6: 19377962-19378961 Medicago truncatula
Medtr6g053730 2.0kb upstream 2.0kb upstream 4645 true chr6: 19373317-19377961 Medicago truncatula
Medtr6g053730 2.0kb upstream 2.0kb upstream 2000 false chr6: 19373317-19375316 Medicago truncatula
Medtr6g053730 2.0kb downstream 2.0kb downstream 4645 true chr6: 19375317-19379961 Medicago truncatula
Medtr6g053730 2.0kb downstream 2.0kb downstream 2000 false chr6: 19377962-19379961 Medicago truncatula
Medtr6g053730 5.0kb upstream 5.0kb upstream 7645 true chr6: 19370317-19377961 Medicago truncatula
Medtr6g053730 5.0kb upstream 5.0kb upstream 5000 false chr6: 19370317-19375316 Medicago truncatula
Medtr6g053730 5.0kb downstream 5.0kb downstream 7645 true chr6: 19375317-19382961 Medicago truncatula
Medtr6g053730 5.0kb downstream 5.0kb downstream 5000 false chr6: 19377962-19382961 Medicago truncatula
Medtr6g053730 10.0kb upstream 10.0kb upstream 12645 true chr6: 19365317-19377961 Medicago truncatula
Medtr6g053730 10.0kb upstream 10.0kb upstream 10000 false chr6: 19365317-19375316 Medicago truncatula
Medtr6g053730 10.0kb downstream 10.0kb downstream 12645 true chr6: 19375317-19387961 Medicago truncatula
Medtr6g053730 10.0kb downstream 10.0kb downstream 10000 false chr6: 19377962-19387961 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314053 5265 Fabidae View MSA
124066905 5270 Rosid View MSA
123747585 5271 Pentapetalae View MSA
122796759 5272 Eudicot View MSA
122049276 5273 Angiosperm View MSA
121349373 5274 Embryophyte View MSA
123424507 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.154     High  
cufflinks 16.25     High Low
cufflinks 16.193     High Low
cufflinks 42.596     High High
cufflinks 26.396     High  
cufflinks 31.985     High  
cufflinks 39.22     High High
cufflinks 18.578     High  
cufflinks 34.781     High  

0 Strain