Gene : Medtr6g053110 M. truncatula Mt4.0v1
Defline:  (1 of 3) PF04278 - Tic22-like family (Tic22) Description:  Tic22 family protein
Genomic Order:  2241 Name:  ? Medtr6g053110
Secondary Identifier:  ? PAC:31105496
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g053110 0.5kb upstream 0.5kb upstream 13793 true chr6: 19048305-19062097 Medicago truncatula
Medtr6g053110 0.5kb upstream 0.5kb upstream 500 false chr6: 19048305-19048804 Medicago truncatula
Medtr6g053110 0.5kb downstream 0.5kb downstream 13793 true chr6: 19048805-19062597 Medicago truncatula
Medtr6g053110 0.5kb downstream 0.5kb downstream 500 false chr6: 19062098-19062597 Medicago truncatula
Medtr6g053110 1.0kb upstream 1.0kb upstream 14293 true chr6: 19047805-19062097 Medicago truncatula
Medtr6g053110 1.0kb upstream 1.0kb upstream 1000 false chr6: 19047805-19048804 Medicago truncatula
Medtr6g053110 1.0kb downstream 1.0kb downstream 14293 true chr6: 19048805-19063097 Medicago truncatula
Medtr6g053110 1.0kb downstream 1.0kb downstream 1000 false chr6: 19062098-19063097 Medicago truncatula
Medtr6g053110 2.0kb upstream 2.0kb upstream 15293 true chr6: 19046805-19062097 Medicago truncatula
Medtr6g053110 2.0kb upstream 2.0kb upstream 2000 false chr6: 19046805-19048804 Medicago truncatula
Medtr6g053110 2.0kb downstream 2.0kb downstream 15293 true chr6: 19048805-19064097 Medicago truncatula
Medtr6g053110 2.0kb downstream 2.0kb downstream 2000 false chr6: 19062098-19064097 Medicago truncatula
Medtr6g053110 5.0kb upstream 5.0kb upstream 18293 true chr6: 19043805-19062097 Medicago truncatula
Medtr6g053110 5.0kb upstream 5.0kb upstream 5000 false chr6: 19043805-19048804 Medicago truncatula
Medtr6g053110 5.0kb downstream 5.0kb downstream 18293 true chr6: 19048805-19067097 Medicago truncatula
Medtr6g053110 5.0kb downstream 5.0kb downstream 5000 false chr6: 19062098-19067097 Medicago truncatula
Medtr6g053110 10.0kb upstream 10.0kb upstream 23293 true chr6: 19038805-19062097 Medicago truncatula
Medtr6g053110 10.0kb upstream 10.0kb upstream 10000 false chr6: 19038805-19048804 Medicago truncatula
Medtr6g053110 10.0kb downstream 10.0kb downstream 23293 true chr6: 19048805-19072097 Medicago truncatula
Medtr6g053110 10.0kb downstream 10.0kb downstream 10000 false chr6: 19062098-19072097 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304584 5265 Fabidae View MSA
124063444 5270 Rosid View MSA
123744483 5271 Pentapetalae View MSA
122790475 5272 Eudicot View MSA
122047380 5273 Angiosperm View MSA
121344233 5274 Embryophyte View MSA
123380010 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.834        
cufflinks 0.843        
cufflinks 0.923        
cufflinks 0.261       Low
cufflinks 1.211       High
cufflinks 0.276       Low
cufflinks 0.493        
cufflinks 0.816        
cufflinks 0.408        

0 Strain