Gene : Medtr6g065650 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR11689:SF91 - CHLORIDE CHANNEL PROTEIN CLC-C Description:  chloride channel ClC1 protein
Genomic Order:  2690 Name:  ? Medtr6g065650
Secondary Identifier:  ? PAC:31102979
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g065650 0.5kb upstream 0.5kb upstream 8111 true chr6: 24327709-24335819 Medicago truncatula
Medtr6g065650 0.5kb upstream 0.5kb upstream 500 false chr6: 24335320-24335819 Medicago truncatula
Medtr6g065650 0.5kb downstream 0.5kb downstream 8111 true chr6: 24327209-24335319 Medicago truncatula
Medtr6g065650 0.5kb downstream 0.5kb downstream 500 false chr6: 24327209-24327708 Medicago truncatula
Medtr6g065650 1.0kb upstream 1.0kb upstream 8611 true chr6: 24327709-24336319 Medicago truncatula
Medtr6g065650 1.0kb upstream 1.0kb upstream 1000 false chr6: 24335320-24336319 Medicago truncatula
Medtr6g065650 1.0kb downstream 1.0kb downstream 8611 true chr6: 24326709-24335319 Medicago truncatula
Medtr6g065650 1.0kb downstream 1.0kb downstream 1000 false chr6: 24326709-24327708 Medicago truncatula
Medtr6g065650 2.0kb upstream 2.0kb upstream 9611 true chr6: 24327709-24337319 Medicago truncatula
Medtr6g065650 2.0kb upstream 2.0kb upstream 2000 false chr6: 24335320-24337319 Medicago truncatula
Medtr6g065650 2.0kb downstream 2.0kb downstream 9611 true chr6: 24325709-24335319 Medicago truncatula
Medtr6g065650 2.0kb downstream 2.0kb downstream 2000 false chr6: 24325709-24327708 Medicago truncatula
Medtr6g065650 5.0kb upstream 5.0kb upstream 12611 true chr6: 24327709-24340319 Medicago truncatula
Medtr6g065650 5.0kb upstream 5.0kb upstream 5000 false chr6: 24335320-24340319 Medicago truncatula
Medtr6g065650 5.0kb downstream 5.0kb downstream 12611 true chr6: 24322709-24335319 Medicago truncatula
Medtr6g065650 5.0kb downstream 5.0kb downstream 5000 false chr6: 24322709-24327708 Medicago truncatula
Medtr6g065650 10.0kb upstream 10.0kb upstream 17611 true chr6: 24327709-24345319 Medicago truncatula
Medtr6g065650 10.0kb upstream 10.0kb upstream 10000 false chr6: 24335320-24345319 Medicago truncatula
Medtr6g065650 10.0kb downstream 10.0kb downstream 17611 true chr6: 24317709-24335319 Medicago truncatula
Medtr6g065650 10.0kb downstream 10.0kb downstream 10000 false chr6: 24317709-24327708 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311944 5265 Fabidae View MSA
124069720 5270 Rosid View MSA
123745841 5271 Pentapetalae View MSA
122787304 5272 Eudicot View MSA
122047226 5273 Angiosperm View MSA
121350154 5274 Embryophyte View MSA
123428433 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.329        
cufflinks 6.781       High
cufflinks 5.705       High
cufflinks 0.983       Low
cufflinks 4.37        
cufflinks 1.09       Low
cufflinks 1.825        
cufflinks 5.766       High
cufflinks 1.27        

0 Strain