Gene : Medtr6g033460 M. truncatula Mt4.0v1
Description:  hypothetical protein Genomic Order:  1398
Name:  ? Medtr6g033460 Secondary Identifier:  ? PAC:31105286
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g033460 0.5kb upstream 0.5kb upstream 4032 true chr6: 10801553-10805584 Medicago truncatula
Medtr6g033460 0.5kb upstream 0.5kb upstream 500 false chr6: 10801553-10802052 Medicago truncatula
Medtr6g033460 0.5kb downstream 0.5kb downstream 4032 true chr6: 10802053-10806084 Medicago truncatula
Medtr6g033460 0.5kb downstream 0.5kb downstream 500 false chr6: 10805585-10806084 Medicago truncatula
Medtr6g033460 1.0kb upstream 1.0kb upstream 4532 true chr6: 10801053-10805584 Medicago truncatula
Medtr6g033460 1.0kb upstream 1.0kb upstream 1000 false chr6: 10801053-10802052 Medicago truncatula
Medtr6g033460 1.0kb downstream 1.0kb downstream 4532 true chr6: 10802053-10806584 Medicago truncatula
Medtr6g033460 1.0kb downstream 1.0kb downstream 1000 false chr6: 10805585-10806584 Medicago truncatula
Medtr6g033460 2.0kb upstream 2.0kb upstream 5532 true chr6: 10800053-10805584 Medicago truncatula
Medtr6g033460 2.0kb upstream 2.0kb upstream 2000 false chr6: 10800053-10802052 Medicago truncatula
Medtr6g033460 2.0kb downstream 2.0kb downstream 5532 true chr6: 10802053-10807584 Medicago truncatula
Medtr6g033460 2.0kb downstream 2.0kb downstream 2000 false chr6: 10805585-10807584 Medicago truncatula
Medtr6g033460 5.0kb upstream 5.0kb upstream 8532 true chr6: 10797053-10805584 Medicago truncatula
Medtr6g033460 5.0kb upstream 5.0kb upstream 5000 false chr6: 10797053-10802052 Medicago truncatula
Medtr6g033460 5.0kb downstream 5.0kb downstream 8532 true chr6: 10802053-10810584 Medicago truncatula
Medtr6g033460 5.0kb downstream 5.0kb downstream 5000 false chr6: 10805585-10810584 Medicago truncatula
Medtr6g033460 10.0kb upstream 10.0kb upstream 13532 true chr6: 10792053-10805584 Medicago truncatula
Medtr6g033460 10.0kb upstream 10.0kb upstream 10000 false chr6: 10792053-10802052 Medicago truncatula
Medtr6g033460 10.0kb downstream 10.0kb downstream 13532 true chr6: 10802053-10815584 Medicago truncatula
Medtr6g033460 10.0kb downstream 10.0kb downstream 10000 false chr6: 10805585-10815584 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029860 5273 Angiosperm View MSA
122314921 5265 Fabidae View MSA
124071412 5270 Rosid View MSA
123753670 5271 Pentapetalae View MSA
122775191 5272 Eudicot View MSA
121350456 5274 Embryophyte View MSA
123381742 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.105        
cufflinks 0.544       High
cufflinks 0.474        
cufflinks 0.053     Low Low
cufflinks 0.486        
cufflinks 0.187        
cufflinks 0.117        
cufflinks 0.478        
cufflinks 0.086     Low  

0 Strain