Gene : Medtr6g033450 M. truncatula Mt4.0v1
Defline:  (1 of 36) PF00407 - Pathogenesis-related protein Bet v I family (Bet_v_1) Description:  pathogenesis-related protein bet V I family protein
Genomic Order:  1396 Name:  ? Medtr6g033450
Secondary Identifier:  ? PAC:31104953
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g033450 0.5kb upstream 0.5kb upstream 1547 true chr6: 10796892-10798438 Medicago truncatula
Medtr6g033450 0.5kb upstream 0.5kb upstream 500 false chr6: 10797939-10798438 Medicago truncatula
Medtr6g033450 0.5kb downstream 0.5kb downstream 1547 true chr6: 10796392-10797938 Medicago truncatula
Medtr6g033450 0.5kb downstream 0.5kb downstream 500 false chr6: 10796392-10796891 Medicago truncatula
Medtr6g033450 1.0kb upstream 1.0kb upstream 2047 true chr6: 10796892-10798938 Medicago truncatula
Medtr6g033450 1.0kb upstream 1.0kb upstream 1000 false chr6: 10797939-10798938 Medicago truncatula
Medtr6g033450 1.0kb downstream 1.0kb downstream 2047 true chr6: 10795892-10797938 Medicago truncatula
Medtr6g033450 1.0kb downstream 1.0kb downstream 1000 false chr6: 10795892-10796891 Medicago truncatula
Medtr6g033450 2.0kb upstream 2.0kb upstream 3047 true chr6: 10796892-10799938 Medicago truncatula
Medtr6g033450 2.0kb upstream 2.0kb upstream 2000 false chr6: 10797939-10799938 Medicago truncatula
Medtr6g033450 2.0kb downstream 2.0kb downstream 3047 true chr6: 10794892-10797938 Medicago truncatula
Medtr6g033450 2.0kb downstream 2.0kb downstream 2000 false chr6: 10794892-10796891 Medicago truncatula
Medtr6g033450 5.0kb upstream 5.0kb upstream 6047 true chr6: 10796892-10802938 Medicago truncatula
Medtr6g033450 5.0kb upstream 5.0kb upstream 5000 false chr6: 10797939-10802938 Medicago truncatula
Medtr6g033450 5.0kb downstream 5.0kb downstream 6047 true chr6: 10791892-10797938 Medicago truncatula
Medtr6g033450 5.0kb downstream 5.0kb downstream 5000 false chr6: 10791892-10796891 Medicago truncatula
Medtr6g033450 10.0kb upstream 10.0kb upstream 11047 true chr6: 10796892-10807938 Medicago truncatula
Medtr6g033450 10.0kb upstream 10.0kb upstream 10000 false chr6: 10797939-10807938 Medicago truncatula
Medtr6g033450 10.0kb downstream 10.0kb downstream 11047 true chr6: 10786892-10797938 Medicago truncatula
Medtr6g033450 10.0kb downstream 10.0kb downstream 10000 false chr6: 10786892-10796891 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312983 5265 Fabidae View MSA
124072279 5270 Rosid View MSA
123752390 5271 Pentapetalae View MSA
122797871 5272 Eudicot View MSA
122048225 5273 Angiosperm View MSA
121351454 5274 Embryophyte View MSA
123382173 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.141        
cufflinks 0.404        
cufflinks 0.552        
cufflinks 26.812     High High
cufflinks 0.259       Low
cufflinks 16.341     High  
cufflinks 22.864     High High
cufflinks 0.364       Low
cufflinks 8.779        

0 Strain