Gene : Medtr6g033315 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR22883:SF80 - PROTEIN S-ACYLTRANSFERASE 5-RELATED Description:  DHHC type zinc finger protein
Genomic Order:  1375 Name:  ? Medtr6g033315
Secondary Identifier:  ? PAC:31103872
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g033315 0.5kb upstream 0.5kb upstream 5116 true chr6: 10644021-10649136 Medicago truncatula
Medtr6g033315 0.5kb upstream 0.5kb upstream 500 false chr6: 10644021-10644520 Medicago truncatula
Medtr6g033315 0.5kb downstream 0.5kb downstream 5116 true chr6: 10644521-10649636 Medicago truncatula
Medtr6g033315 0.5kb downstream 0.5kb downstream 500 false chr6: 10649137-10649636 Medicago truncatula
Medtr6g033315 1.0kb upstream 1.0kb upstream 5616 true chr6: 10643521-10649136 Medicago truncatula
Medtr6g033315 1.0kb upstream 1.0kb upstream 1000 false chr6: 10643521-10644520 Medicago truncatula
Medtr6g033315 1.0kb downstream 1.0kb downstream 5616 true chr6: 10644521-10650136 Medicago truncatula
Medtr6g033315 1.0kb downstream 1.0kb downstream 1000 false chr6: 10649137-10650136 Medicago truncatula
Medtr6g033315 2.0kb upstream 2.0kb upstream 6616 true chr6: 10642521-10649136 Medicago truncatula
Medtr6g033315 2.0kb upstream 2.0kb upstream 2000 false chr6: 10642521-10644520 Medicago truncatula
Medtr6g033315 2.0kb downstream 2.0kb downstream 6616 true chr6: 10644521-10651136 Medicago truncatula
Medtr6g033315 2.0kb downstream 2.0kb downstream 2000 false chr6: 10649137-10651136 Medicago truncatula
Medtr6g033315 5.0kb upstream 5.0kb upstream 9616 true chr6: 10639521-10649136 Medicago truncatula
Medtr6g033315 5.0kb upstream 5.0kb upstream 5000 false chr6: 10639521-10644520 Medicago truncatula
Medtr6g033315 5.0kb downstream 5.0kb downstream 9616 true chr6: 10644521-10654136 Medicago truncatula
Medtr6g033315 5.0kb downstream 5.0kb downstream 5000 false chr6: 10649137-10654136 Medicago truncatula
Medtr6g033315 10.0kb upstream 10.0kb upstream 14616 true chr6: 10634521-10649136 Medicago truncatula
Medtr6g033315 10.0kb upstream 10.0kb upstream 10000 false chr6: 10634521-10644520 Medicago truncatula
Medtr6g033315 10.0kb downstream 10.0kb downstream 14616 true chr6: 10644521-10659136 Medicago truncatula
Medtr6g033315 10.0kb downstream 10.0kb downstream 10000 false chr6: 10649137-10659136 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303264 5265 Fabidae View MSA
124064327 5270 Rosid View MSA
123741712 5271 Pentapetalae View MSA
122787049 5272 Eudicot View MSA
122047692 5273 Angiosperm View MSA
123428988 5275 Viridiplantae View MSA
121350909 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.338       High
cufflinks 4.849        
cufflinks 4.408        
cufflinks 7.315       High
cufflinks 5.995        
cufflinks 3.934       Low
cufflinks 5.717        
cufflinks 3.919       Low
cufflinks 6.897        

0 Strain