Gene : Medtr6g034890 M. truncatula Mt4.0v1
Description:  hypothetical protein Genomic Order:  1543
Name:  ? Medtr6g034890 Secondary Identifier:  ? PAC:31101905
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g034890 0.5kb upstream 0.5kb upstream 917 true chr6: 12188129-12189045 Medicago truncatula
Medtr6g034890 0.5kb upstream 0.5kb upstream 500 false chr6: 12188129-12188628 Medicago truncatula
Medtr6g034890 0.5kb downstream 0.5kb downstream 917 true chr6: 12188629-12189545 Medicago truncatula
Medtr6g034890 0.5kb downstream 0.5kb downstream 500 false chr6: 12189046-12189545 Medicago truncatula
Medtr6g034890 1.0kb upstream 1.0kb upstream 1417 true chr6: 12187629-12189045 Medicago truncatula
Medtr6g034890 1.0kb upstream 1.0kb upstream 1000 false chr6: 12187629-12188628 Medicago truncatula
Medtr6g034890 1.0kb downstream 1.0kb downstream 1417 true chr6: 12188629-12190045 Medicago truncatula
Medtr6g034890 1.0kb downstream 1.0kb downstream 1000 false chr6: 12189046-12190045 Medicago truncatula
Medtr6g034890 2.0kb upstream 2.0kb upstream 2417 true chr6: 12186629-12189045 Medicago truncatula
Medtr6g034890 2.0kb upstream 2.0kb upstream 2000 false chr6: 12186629-12188628 Medicago truncatula
Medtr6g034890 2.0kb downstream 2.0kb downstream 2417 true chr6: 12188629-12191045 Medicago truncatula
Medtr6g034890 2.0kb downstream 2.0kb downstream 2000 false chr6: 12189046-12191045 Medicago truncatula
Medtr6g034890 5.0kb upstream 5.0kb upstream 5417 true chr6: 12183629-12189045 Medicago truncatula
Medtr6g034890 5.0kb upstream 5.0kb upstream 5000 false chr6: 12183629-12188628 Medicago truncatula
Medtr6g034890 5.0kb downstream 5.0kb downstream 5417 true chr6: 12188629-12194045 Medicago truncatula
Medtr6g034890 5.0kb downstream 5.0kb downstream 5000 false chr6: 12189046-12194045 Medicago truncatula
Medtr6g034890 10.0kb upstream 10.0kb upstream 10417 true chr6: 12178629-12189045 Medicago truncatula
Medtr6g034890 10.0kb upstream 10.0kb upstream 10000 false chr6: 12178629-12188628 Medicago truncatula
Medtr6g034890 10.0kb downstream 10.0kb downstream 10417 true chr6: 12188629-12199045 Medicago truncatula
Medtr6g034890 10.0kb downstream 10.0kb downstream 10000 false chr6: 12189046-12199045 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121627049 5273 Angiosperm Singleton cluster - no MSA
122265181 5265 Fabidae Singleton cluster - no MSA
124006244 5270 Rosid Singleton cluster - no MSA
123580297 5271 Pentapetalae Singleton cluster - no MSA
122615002 5272 Eudicot Singleton cluster - no MSA
120899153 5274 Embryophyte Singleton cluster - no MSA
122939808 5275 Viridiplantae Singleton cluster - no MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 38.497     High  
cufflinks 43.019     High  
cufflinks 45.539     High  
cufflinks 46.301     High  
cufflinks 67.265     High High
cufflinks 16.517     High Low
cufflinks 24.075     High  
cufflinks 37.529     High  
cufflinks 27.328     High  

0 Strain