Gene : Medtr6g038150 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12161:SF21 - REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN Description:  regulator of Vps4 activity in the MVB pathway protein
Genomic Order:  1687 Name:  ? Medtr6g038150
Secondary Identifier:  ? PAC:31104739
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g038150 0.5kb upstream 0.5kb upstream 7259 true chr6: 13630959-13638217 Medicago truncatula
Medtr6g038150 0.5kb upstream 0.5kb upstream 500 false chr6: 13630959-13631458 Medicago truncatula
Medtr6g038150 0.5kb downstream 0.5kb downstream 7259 true chr6: 13631459-13638717 Medicago truncatula
Medtr6g038150 0.5kb downstream 0.5kb downstream 500 false chr6: 13638218-13638717 Medicago truncatula
Medtr6g038150 1.0kb upstream 1.0kb upstream 7759 true chr6: 13630459-13638217 Medicago truncatula
Medtr6g038150 1.0kb upstream 1.0kb upstream 1000 false chr6: 13630459-13631458 Medicago truncatula
Medtr6g038150 1.0kb downstream 1.0kb downstream 7759 true chr6: 13631459-13639217 Medicago truncatula
Medtr6g038150 1.0kb downstream 1.0kb downstream 1000 false chr6: 13638218-13639217 Medicago truncatula
Medtr6g038150 2.0kb upstream 2.0kb upstream 8759 true chr6: 13629459-13638217 Medicago truncatula
Medtr6g038150 2.0kb upstream 2.0kb upstream 2000 false chr6: 13629459-13631458 Medicago truncatula
Medtr6g038150 2.0kb downstream 2.0kb downstream 8759 true chr6: 13631459-13640217 Medicago truncatula
Medtr6g038150 2.0kb downstream 2.0kb downstream 2000 false chr6: 13638218-13640217 Medicago truncatula
Medtr6g038150 5.0kb upstream 5.0kb upstream 11759 true chr6: 13626459-13638217 Medicago truncatula
Medtr6g038150 5.0kb upstream 5.0kb upstream 5000 false chr6: 13626459-13631458 Medicago truncatula
Medtr6g038150 5.0kb downstream 5.0kb downstream 11759 true chr6: 13631459-13643217 Medicago truncatula
Medtr6g038150 5.0kb downstream 5.0kb downstream 5000 false chr6: 13638218-13643217 Medicago truncatula
Medtr6g038150 10.0kb upstream 10.0kb upstream 16759 true chr6: 13621459-13638217 Medicago truncatula
Medtr6g038150 10.0kb upstream 10.0kb upstream 10000 false chr6: 13621459-13631458 Medicago truncatula
Medtr6g038150 10.0kb downstream 10.0kb downstream 16759 true chr6: 13631459-13648217 Medicago truncatula
Medtr6g038150 10.0kb downstream 10.0kb downstream 10000 false chr6: 13638218-13648217 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301287 5265 Fabidae View MSA
124068076 5270 Rosid View MSA
123736868 5271 Pentapetalae View MSA
122789571 5272 Eudicot View MSA
122045314 5273 Angiosperm View MSA
121350449 5274 Embryophyte View MSA
123424640 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.082        
cufflinks 4.153        
cufflinks 3.903        
cufflinks 6.089       High
cufflinks 3.853        
cufflinks 3.717        
cufflinks 4.623        
cufflinks 3.561       Low
cufflinks 6.179       High

0 Strain