Gene : Medtr6g042030 M. truncatula Mt4.0v1
Defline:  (1 of 2) PF11282 - Protein of unknown function (DUF3082) (DUF3082) Description:  transmembrane protein, putative
Genomic Order:  1802 Name:  ? Medtr6g042030
Secondary Identifier:  ? PAC:31104496
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g042030 0.5kb upstream 0.5kb upstream 3594 true chr6: 14510411-14514004 Medicago truncatula
Medtr6g042030 0.5kb upstream 0.5kb upstream 500 false chr6: 14513505-14514004 Medicago truncatula
Medtr6g042030 0.5kb downstream 0.5kb downstream 3594 true chr6: 14509911-14513504 Medicago truncatula
Medtr6g042030 0.5kb downstream 0.5kb downstream 500 false chr6: 14509911-14510410 Medicago truncatula
Medtr6g042030 1.0kb upstream 1.0kb upstream 4094 true chr6: 14510411-14514504 Medicago truncatula
Medtr6g042030 1.0kb upstream 1.0kb upstream 1000 false chr6: 14513505-14514504 Medicago truncatula
Medtr6g042030 1.0kb downstream 1.0kb downstream 4094 true chr6: 14509411-14513504 Medicago truncatula
Medtr6g042030 1.0kb downstream 1.0kb downstream 1000 false chr6: 14509411-14510410 Medicago truncatula
Medtr6g042030 2.0kb upstream 2.0kb upstream 5094 true chr6: 14510411-14515504 Medicago truncatula
Medtr6g042030 2.0kb upstream 2.0kb upstream 2000 false chr6: 14513505-14515504 Medicago truncatula
Medtr6g042030 2.0kb downstream 2.0kb downstream 5094 true chr6: 14508411-14513504 Medicago truncatula
Medtr6g042030 2.0kb downstream 2.0kb downstream 2000 false chr6: 14508411-14510410 Medicago truncatula
Medtr6g042030 5.0kb upstream 5.0kb upstream 8094 true chr6: 14510411-14518504 Medicago truncatula
Medtr6g042030 5.0kb upstream 5.0kb upstream 5000 false chr6: 14513505-14518504 Medicago truncatula
Medtr6g042030 5.0kb downstream 5.0kb downstream 8094 true chr6: 14505411-14513504 Medicago truncatula
Medtr6g042030 5.0kb downstream 5.0kb downstream 5000 false chr6: 14505411-14510410 Medicago truncatula
Medtr6g042030 10.0kb upstream 10.0kb upstream 13094 true chr6: 14510411-14523504 Medicago truncatula
Medtr6g042030 10.0kb upstream 10.0kb upstream 10000 false chr6: 14513505-14523504 Medicago truncatula
Medtr6g042030 10.0kb downstream 10.0kb downstream 13094 true chr6: 14500411-14513504 Medicago truncatula
Medtr6g042030 10.0kb downstream 10.0kb downstream 10000 false chr6: 14500411-14510410 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121657868 5273 Angiosperm View MSA
122298507 5265 Fabidae View MSA
124040367 5270 Rosid View MSA
123611807 5271 Pentapetalae View MSA
122646351 5272 Eudicot View MSA
120929894 5274 Embryophyte View MSA
123428138 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.89        
cufflinks 6.41        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 16.951     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low Low
cufflinks 3.628        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain