Gene : Medtr6g043810 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11206:SF75 - MATE EFFLUX FAMILY PROTEIN Description:  MATE efflux family protein
Genomic Order:  1865 Name:  ? Medtr6g043810
Secondary Identifier:  ? PAC:31102636
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g043810 0.5kb upstream 0.5kb upstream 7934 true chr6: 15093381-15101314 Medicago truncatula
Medtr6g043810 0.5kb upstream 0.5kb upstream 500 false chr6: 15100815-15101314 Medicago truncatula
Medtr6g043810 0.5kb downstream 0.5kb downstream 7934 true chr6: 15092881-15100814 Medicago truncatula
Medtr6g043810 0.5kb downstream 0.5kb downstream 500 false chr6: 15092881-15093380 Medicago truncatula
Medtr6g043810 1.0kb upstream 1.0kb upstream 8434 true chr6: 15093381-15101814 Medicago truncatula
Medtr6g043810 1.0kb upstream 1.0kb upstream 1000 false chr6: 15100815-15101814 Medicago truncatula
Medtr6g043810 1.0kb downstream 1.0kb downstream 8434 true chr6: 15092381-15100814 Medicago truncatula
Medtr6g043810 1.0kb downstream 1.0kb downstream 1000 false chr6: 15092381-15093380 Medicago truncatula
Medtr6g043810 2.0kb upstream 2.0kb upstream 9434 true chr6: 15093381-15102814 Medicago truncatula
Medtr6g043810 2.0kb upstream 2.0kb upstream 2000 false chr6: 15100815-15102814 Medicago truncatula
Medtr6g043810 2.0kb downstream 2.0kb downstream 9434 true chr6: 15091381-15100814 Medicago truncatula
Medtr6g043810 2.0kb downstream 2.0kb downstream 2000 false chr6: 15091381-15093380 Medicago truncatula
Medtr6g043810 5.0kb upstream 5.0kb upstream 12434 true chr6: 15093381-15105814 Medicago truncatula
Medtr6g043810 5.0kb upstream 5.0kb upstream 5000 false chr6: 15100815-15105814 Medicago truncatula
Medtr6g043810 5.0kb downstream 5.0kb downstream 12434 true chr6: 15088381-15100814 Medicago truncatula
Medtr6g043810 5.0kb downstream 5.0kb downstream 5000 false chr6: 15088381-15093380 Medicago truncatula
Medtr6g043810 10.0kb upstream 10.0kb upstream 17434 true chr6: 15093381-15110814 Medicago truncatula
Medtr6g043810 10.0kb upstream 10.0kb upstream 10000 false chr6: 15100815-15110814 Medicago truncatula
Medtr6g043810 10.0kb downstream 10.0kb downstream 17434 true chr6: 15083381-15100814 Medicago truncatula
Medtr6g043810 10.0kb downstream 10.0kb downstream 10000 false chr6: 15083381-15093380 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299053 5265 Fabidae View MSA
124062367 5270 Rosid View MSA
123750437 5271 Pentapetalae View MSA
122790105 5272 Eudicot View MSA
122045079 5273 Angiosperm View MSA
121345520 5274 Embryophyte View MSA
123428088 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.089        
cufflinks 0.031     Low  
cufflinks 0.039     Low  
cufflinks 0.021     Low  
cufflinks 0.025     Low  
cufflinks 0.003     Low Low
cufflinks 0.122       High
cufflinks 0.021     Low  
cufflinks 0.165       High

0 Strain