Gene : Medtr6g043740 M. truncatula Mt4.0v1
Defline:  (1 of 4) 1.3.1.22 - 3-oxo-5-alpha-steroid 4-dehydrogenase (NADP(+)) / Cholestenone 5-alpha-reductase Description:  3-oxo-5-alpha-steroid 4-dehydrogenase family protein
Genomic Order:  1641 Name:  ? Medtr6g043740
Secondary Identifier:  ? PAC:31103000
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g043740 0.5kb upstream 0.5kb upstream 2904 true chr6: 13210302-13213205 Medicago truncatula
Medtr6g043740 0.5kb upstream 0.5kb upstream 500 false chr6: 13210302-13210801 Medicago truncatula
Medtr6g043740 0.5kb downstream 0.5kb downstream 2904 true chr6: 13210802-13213705 Medicago truncatula
Medtr6g043740 0.5kb downstream 0.5kb downstream 500 false chr6: 13213206-13213705 Medicago truncatula
Medtr6g043740 1.0kb upstream 1.0kb upstream 3404 true chr6: 13209802-13213205 Medicago truncatula
Medtr6g043740 1.0kb upstream 1.0kb upstream 1000 false chr6: 13209802-13210801 Medicago truncatula
Medtr6g043740 1.0kb downstream 1.0kb downstream 3404 true chr6: 13210802-13214205 Medicago truncatula
Medtr6g043740 1.0kb downstream 1.0kb downstream 1000 false chr6: 13213206-13214205 Medicago truncatula
Medtr6g043740 2.0kb upstream 2.0kb upstream 4404 true chr6: 13208802-13213205 Medicago truncatula
Medtr6g043740 2.0kb upstream 2.0kb upstream 2000 false chr6: 13208802-13210801 Medicago truncatula
Medtr6g043740 2.0kb downstream 2.0kb downstream 4404 true chr6: 13210802-13215205 Medicago truncatula
Medtr6g043740 2.0kb downstream 2.0kb downstream 2000 false chr6: 13213206-13215205 Medicago truncatula
Medtr6g043740 5.0kb upstream 5.0kb upstream 7404 true chr6: 13205802-13213205 Medicago truncatula
Medtr6g043740 5.0kb upstream 5.0kb upstream 5000 false chr6: 13205802-13210801 Medicago truncatula
Medtr6g043740 5.0kb downstream 5.0kb downstream 7404 true chr6: 13210802-13218205 Medicago truncatula
Medtr6g043740 5.0kb downstream 5.0kb downstream 5000 false chr6: 13213206-13218205 Medicago truncatula
Medtr6g043740 10.0kb upstream 10.0kb upstream 12404 true chr6: 13200802-13213205 Medicago truncatula
Medtr6g043740 10.0kb upstream 10.0kb upstream 10000 false chr6: 13200802-13210801 Medicago truncatula
Medtr6g043740 10.0kb downstream 10.0kb downstream 12404 true chr6: 13210802-13223205 Medicago truncatula
Medtr6g043740 10.0kb downstream 10.0kb downstream 10000 false chr6: 13213206-13223205 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311323 5265 Fabidae View MSA
124060747 5270 Rosid View MSA
123751267 5271 Pentapetalae View MSA
122793833 5272 Eudicot View MSA
122045974 5273 Angiosperm View MSA
121350714 5274 Embryophyte View MSA
123428210 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 15.984     High  
cufflinks 3.718        
cufflinks 0.009     Low Low
cufflinks 11.305     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low Low
cufflinks 6.544        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain