Gene : Medtr6g045257 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR22814//PTHR22814:SF52 - COPPER TRANSPORT PROTEIN ATOX1-RELATED Description:  heavy metal-associated domain protein, putative
Genomic Order:  1957 Name:  ? Medtr6g045257
Secondary Identifier:  ? PAC:31104410
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g045257 0.5kb upstream 0.5kb upstream 1570 true chr6: 16180692-16182261 Medicago truncatula
Medtr6g045257 0.5kb upstream 0.5kb upstream 500 false chr6: 16180692-16181191 Medicago truncatula
Medtr6g045257 0.5kb downstream 0.5kb downstream 1570 true chr6: 16181192-16182761 Medicago truncatula
Medtr6g045257 0.5kb downstream 0.5kb downstream 500 false chr6: 16182262-16182761 Medicago truncatula
Medtr6g045257 1.0kb upstream 1.0kb upstream 2070 true chr6: 16180192-16182261 Medicago truncatula
Medtr6g045257 1.0kb upstream 1.0kb upstream 1000 false chr6: 16180192-16181191 Medicago truncatula
Medtr6g045257 1.0kb downstream 1.0kb downstream 2070 true chr6: 16181192-16183261 Medicago truncatula
Medtr6g045257 1.0kb downstream 1.0kb downstream 1000 false chr6: 16182262-16183261 Medicago truncatula
Medtr6g045257 2.0kb upstream 2.0kb upstream 3070 true chr6: 16179192-16182261 Medicago truncatula
Medtr6g045257 2.0kb upstream 2.0kb upstream 2000 false chr6: 16179192-16181191 Medicago truncatula
Medtr6g045257 2.0kb downstream 2.0kb downstream 3070 true chr6: 16181192-16184261 Medicago truncatula
Medtr6g045257 2.0kb downstream 2.0kb downstream 2000 false chr6: 16182262-16184261 Medicago truncatula
Medtr6g045257 5.0kb upstream 5.0kb upstream 6070 true chr6: 16176192-16182261 Medicago truncatula
Medtr6g045257 5.0kb upstream 5.0kb upstream 5000 false chr6: 16176192-16181191 Medicago truncatula
Medtr6g045257 5.0kb downstream 5.0kb downstream 6070 true chr6: 16181192-16187261 Medicago truncatula
Medtr6g045257 5.0kb downstream 5.0kb downstream 5000 false chr6: 16182262-16187261 Medicago truncatula
Medtr6g045257 10.0kb upstream 10.0kb upstream 11070 true chr6: 16171192-16182261 Medicago truncatula
Medtr6g045257 10.0kb upstream 10.0kb upstream 10000 false chr6: 16171192-16181191 Medicago truncatula
Medtr6g045257 10.0kb downstream 10.0kb downstream 11070 true chr6: 16181192-16192261 Medicago truncatula
Medtr6g045257 10.0kb downstream 10.0kb downstream 10000 false chr6: 16182262-16192261 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303927 5265 Fabidae View MSA
124061014 5270 Rosid View MSA
123749167 5271 Pentapetalae View MSA
122790653 5272 Eudicot View MSA
122051560 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.705     High High
cufflinks 9.958     High  
cufflinks 9.819        
cufflinks 5.76       Low
cufflinks 10.335     High  
cufflinks 17.583     High  
cufflinks 19.827     High High
cufflinks 8.498        
cufflinks 10.442     High  

0 Strain