Gene : Medtr7g088760 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR24006:SF520 - TRAF-LIKE FAMILY PROTEIN-RELATED Description:  ubiquitin carboxyl-terminal hydrolase-like protein
Genomic Order:  4164 Name:  ? Medtr7g088760
Secondary Identifier:  ? PAC:31083306
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g088760 0.5kb upstream 0.5kb upstream 11734 true chr7: 34624173-34635906 Medicago truncatula
Medtr7g088760 0.5kb upstream 0.5kb upstream 500 false chr7: 34635407-34635906 Medicago truncatula
Medtr7g088760 0.5kb downstream 0.5kb downstream 11734 true chr7: 34623673-34635406 Medicago truncatula
Medtr7g088760 0.5kb downstream 0.5kb downstream 500 false chr7: 34623673-34624172 Medicago truncatula
Medtr7g088760 1.0kb upstream 1.0kb upstream 12234 true chr7: 34624173-34636406 Medicago truncatula
Medtr7g088760 1.0kb upstream 1.0kb upstream 1000 false chr7: 34635407-34636406 Medicago truncatula
Medtr7g088760 1.0kb downstream 1.0kb downstream 12234 true chr7: 34623173-34635406 Medicago truncatula
Medtr7g088760 1.0kb downstream 1.0kb downstream 1000 false chr7: 34623173-34624172 Medicago truncatula
Medtr7g088760 2.0kb upstream 2.0kb upstream 13234 true chr7: 34624173-34637406 Medicago truncatula
Medtr7g088760 2.0kb upstream 2.0kb upstream 2000 false chr7: 34635407-34637406 Medicago truncatula
Medtr7g088760 2.0kb downstream 2.0kb downstream 13234 true chr7: 34622173-34635406 Medicago truncatula
Medtr7g088760 2.0kb downstream 2.0kb downstream 2000 false chr7: 34622173-34624172 Medicago truncatula
Medtr7g088760 5.0kb upstream 5.0kb upstream 16234 true chr7: 34624173-34640406 Medicago truncatula
Medtr7g088760 5.0kb upstream 5.0kb upstream 5000 false chr7: 34635407-34640406 Medicago truncatula
Medtr7g088760 5.0kb downstream 5.0kb downstream 16234 true chr7: 34619173-34635406 Medicago truncatula
Medtr7g088760 5.0kb downstream 5.0kb downstream 5000 false chr7: 34619173-34624172 Medicago truncatula
Medtr7g088760 10.0kb upstream 10.0kb upstream 21234 true chr7: 34624173-34645406 Medicago truncatula
Medtr7g088760 10.0kb upstream 10.0kb upstream 10000 false chr7: 34635407-34645406 Medicago truncatula
Medtr7g088760 10.0kb downstream 10.0kb downstream 21234 true chr7: 34614173-34635406 Medicago truncatula
Medtr7g088760 10.0kb downstream 10.0kb downstream 10000 false chr7: 34614173-34624172 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302403 5265 Fabidae View MSA
124064988 5270 Rosid View MSA
123740108 5271 Pentapetalae View MSA
122790123 5272 Eudicot View MSA
122043938 5273 Angiosperm View MSA
121310212 5274 Embryophyte View MSA
123426305 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.893       High
cufflinks 1.139        
cufflinks 1.228        
cufflinks 0.317       Low
cufflinks 1.201        
cufflinks 0.342       Low
cufflinks 1.137        
cufflinks 1.096        
cufflinks 0.778        

0 Strain