Gene : Medtr7g088740 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR32518:SF3 - 4-ALPHA-GLUCANOTRANSFERASE DPE2 Description:  4-alpha-glucanotransferase DPE2
Genomic Order:  4162 Name:  ? Medtr7g088740
Secondary Identifier:  ? PAC:31083134
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5941 Medicago truncatula pathologic  
Mtruncatula PWY-6724 Medicago truncatula pathologic  
Mtruncatula PWY-7238 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g088740 0.5kb upstream 0.5kb upstream 10149 true chr7: 34609071-34619219 Medicago truncatula
Medtr7g088740 0.5kb upstream 0.5kb upstream 500 false chr7: 34609071-34609570 Medicago truncatula
Medtr7g088740 0.5kb downstream 0.5kb downstream 10149 true chr7: 34609571-34619719 Medicago truncatula
Medtr7g088740 0.5kb downstream 0.5kb downstream 500 false chr7: 34619220-34619719 Medicago truncatula
Medtr7g088740 1.0kb upstream 1.0kb upstream 10649 true chr7: 34608571-34619219 Medicago truncatula
Medtr7g088740 1.0kb upstream 1.0kb upstream 1000 false chr7: 34608571-34609570 Medicago truncatula
Medtr7g088740 1.0kb downstream 1.0kb downstream 10649 true chr7: 34609571-34620219 Medicago truncatula
Medtr7g088740 1.0kb downstream 1.0kb downstream 1000 false chr7: 34619220-34620219 Medicago truncatula
Medtr7g088740 2.0kb upstream 2.0kb upstream 11649 true chr7: 34607571-34619219 Medicago truncatula
Medtr7g088740 2.0kb upstream 2.0kb upstream 2000 false chr7: 34607571-34609570 Medicago truncatula
Medtr7g088740 2.0kb downstream 2.0kb downstream 11649 true chr7: 34609571-34621219 Medicago truncatula
Medtr7g088740 2.0kb downstream 2.0kb downstream 2000 false chr7: 34619220-34621219 Medicago truncatula
Medtr7g088740 5.0kb upstream 5.0kb upstream 14649 true chr7: 34604571-34619219 Medicago truncatula
Medtr7g088740 5.0kb upstream 5.0kb upstream 5000 false chr7: 34604571-34609570 Medicago truncatula
Medtr7g088740 5.0kb downstream 5.0kb downstream 14649 true chr7: 34609571-34624219 Medicago truncatula
Medtr7g088740 5.0kb downstream 5.0kb downstream 5000 false chr7: 34619220-34624219 Medicago truncatula
Medtr7g088740 10.0kb upstream 10.0kb upstream 19649 true chr7: 34599571-34619219 Medicago truncatula
Medtr7g088740 10.0kb upstream 10.0kb upstream 10000 false chr7: 34599571-34609570 Medicago truncatula
Medtr7g088740 10.0kb downstream 10.0kb downstream 19649 true chr7: 34609571-34629219 Medicago truncatula
Medtr7g088740 10.0kb downstream 10.0kb downstream 10000 false chr7: 34619220-34629219 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310659 5265 Fabidae View MSA
124066396 5270 Rosid View MSA
123736584 5271 Pentapetalae View MSA
122793491 5272 Eudicot View MSA
122045486 5273 Angiosperm View MSA
121345018 5274 Embryophyte View MSA
123425111 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.768        
cufflinks 5.125        
cufflinks 7.542        
cufflinks 0.452       Low
cufflinks 13.257     High High
cufflinks 0.421       Low
cufflinks 1.535        
cufflinks 5.35        
cufflinks 1.318        

0 Strain