Gene : Medtr7g089040 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR23077:SF27 - SPERMATOGENESIS-ASSOCIATED PROTEIN 5 Description:  calmodulin-interacting-like protein
Genomic Order:  4182 Name:  ? Medtr7g089040
Secondary Identifier:  ? PAC:31080433
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g089040 0.5kb upstream 0.5kb upstream 13644 true chr7: 34778371-34792014 Medicago truncatula
Medtr7g089040 0.5kb upstream 0.5kb upstream 500 false chr7: 34791515-34792014 Medicago truncatula
Medtr7g089040 0.5kb downstream 0.5kb downstream 13644 true chr7: 34777871-34791514 Medicago truncatula
Medtr7g089040 0.5kb downstream 0.5kb downstream 500 false chr7: 34777871-34778370 Medicago truncatula
Medtr7g089040 1.0kb upstream 1.0kb upstream 14144 true chr7: 34778371-34792514 Medicago truncatula
Medtr7g089040 1.0kb upstream 1.0kb upstream 1000 false chr7: 34791515-34792514 Medicago truncatula
Medtr7g089040 1.0kb downstream 1.0kb downstream 14144 true chr7: 34777371-34791514 Medicago truncatula
Medtr7g089040 1.0kb downstream 1.0kb downstream 1000 false chr7: 34777371-34778370 Medicago truncatula
Medtr7g089040 2.0kb upstream 2.0kb upstream 15144 true chr7: 34778371-34793514 Medicago truncatula
Medtr7g089040 2.0kb upstream 2.0kb upstream 2000 false chr7: 34791515-34793514 Medicago truncatula
Medtr7g089040 2.0kb downstream 2.0kb downstream 15144 true chr7: 34776371-34791514 Medicago truncatula
Medtr7g089040 2.0kb downstream 2.0kb downstream 2000 false chr7: 34776371-34778370 Medicago truncatula
Medtr7g089040 5.0kb upstream 5.0kb upstream 18144 true chr7: 34778371-34796514 Medicago truncatula
Medtr7g089040 5.0kb upstream 5.0kb upstream 5000 false chr7: 34791515-34796514 Medicago truncatula
Medtr7g089040 5.0kb downstream 5.0kb downstream 18144 true chr7: 34773371-34791514 Medicago truncatula
Medtr7g089040 5.0kb downstream 5.0kb downstream 5000 false chr7: 34773371-34778370 Medicago truncatula
Medtr7g089040 10.0kb upstream 10.0kb upstream 23144 true chr7: 34778371-34801514 Medicago truncatula
Medtr7g089040 10.0kb upstream 10.0kb upstream 10000 false chr7: 34791515-34801514 Medicago truncatula
Medtr7g089040 10.0kb downstream 10.0kb downstream 23144 true chr7: 34768371-34791514 Medicago truncatula
Medtr7g089040 10.0kb downstream 10.0kb downstream 10000 false chr7: 34768371-34778370 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303948 5265 Fabidae View MSA
124067886 5270 Rosid View MSA
123737682 5271 Pentapetalae View MSA
122793147 5272 Eudicot View MSA
122041889 5273 Angiosperm View MSA
121345411 5274 Embryophyte View MSA
123426108 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.43        
cufflinks 1.132        
cufflinks 1.208        
cufflinks 0.304       Low
cufflinks 1.765       High
cufflinks 0.226       Low
cufflinks 0.541        
cufflinks 1.12        
cufflinks 0.56        

0 Strain