Gene : Medtr7g088980 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR23077:SF54 - CELL DIVISION CONTROL PROTEIN 48 HOMOLOG B Description:  cell division cycle protein-like/CDC48 protein
Genomic Order:  4179 Name:  ? Medtr7g088980
Secondary Identifier:  ? PAC:31078523
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g088980 0.5kb upstream 0.5kb upstream 7762 true chr7: 34742807-34750568 Medicago truncatula
Medtr7g088980 0.5kb upstream 0.5kb upstream 500 false chr7: 34742807-34743306 Medicago truncatula
Medtr7g088980 0.5kb downstream 0.5kb downstream 7762 true chr7: 34743307-34751068 Medicago truncatula
Medtr7g088980 0.5kb downstream 0.5kb downstream 500 false chr7: 34750569-34751068 Medicago truncatula
Medtr7g088980 1.0kb upstream 1.0kb upstream 8262 true chr7: 34742307-34750568 Medicago truncatula
Medtr7g088980 1.0kb upstream 1.0kb upstream 1000 false chr7: 34742307-34743306 Medicago truncatula
Medtr7g088980 1.0kb downstream 1.0kb downstream 8262 true chr7: 34743307-34751568 Medicago truncatula
Medtr7g088980 1.0kb downstream 1.0kb downstream 1000 false chr7: 34750569-34751568 Medicago truncatula
Medtr7g088980 2.0kb upstream 2.0kb upstream 9262 true chr7: 34741307-34750568 Medicago truncatula
Medtr7g088980 2.0kb upstream 2.0kb upstream 2000 false chr7: 34741307-34743306 Medicago truncatula
Medtr7g088980 2.0kb downstream 2.0kb downstream 9262 true chr7: 34743307-34752568 Medicago truncatula
Medtr7g088980 2.0kb downstream 2.0kb downstream 2000 false chr7: 34750569-34752568 Medicago truncatula
Medtr7g088980 5.0kb upstream 5.0kb upstream 12262 true chr7: 34738307-34750568 Medicago truncatula
Medtr7g088980 5.0kb upstream 5.0kb upstream 5000 false chr7: 34738307-34743306 Medicago truncatula
Medtr7g088980 5.0kb downstream 5.0kb downstream 12262 true chr7: 34743307-34755568 Medicago truncatula
Medtr7g088980 5.0kb downstream 5.0kb downstream 5000 false chr7: 34750569-34755568 Medicago truncatula
Medtr7g088980 10.0kb upstream 10.0kb upstream 17262 true chr7: 34733307-34750568 Medicago truncatula
Medtr7g088980 10.0kb upstream 10.0kb upstream 10000 false chr7: 34733307-34743306 Medicago truncatula
Medtr7g088980 10.0kb downstream 10.0kb downstream 17262 true chr7: 34743307-34760568 Medicago truncatula
Medtr7g088980 10.0kb downstream 10.0kb downstream 10000 false chr7: 34750569-34760568 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306713 5265 Fabidae View MSA
124050290 5270 Rosid View MSA
123738880 5271 Pentapetalae View MSA
122786580 5272 Eudicot View MSA
122047807 5273 Angiosperm View MSA
121345227 5274 Embryophyte View MSA
123426108 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.436        
cufflinks 0.577        
cufflinks 0.758       High
cufflinks 0.301        
cufflinks 0.796       High
cufflinks 0.185       Low
cufflinks 0.336        
cufflinks 0.669        
cufflinks 0.436        

0 Strain