Gene : Medtr7g089800 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR22952:SF206 - TRANSCRIPTION FACTOR TGA2 Description:  leucine zipper transcription factor
Genomic Order:  4235 Name:  ? Medtr7g089800
Secondary Identifier:  ? PAC:31082724
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g089800 0.5kb upstream 0.5kb upstream 5969 true chr7: 35185862-35191830 Medicago truncatula
Medtr7g089800 0.5kb upstream 0.5kb upstream 500 false chr7: 35191331-35191830 Medicago truncatula
Medtr7g089800 0.5kb downstream 0.5kb downstream 5969 true chr7: 35185362-35191330 Medicago truncatula
Medtr7g089800 0.5kb downstream 0.5kb downstream 500 false chr7: 35185362-35185861 Medicago truncatula
Medtr7g089800 1.0kb upstream 1.0kb upstream 6469 true chr7: 35185862-35192330 Medicago truncatula
Medtr7g089800 1.0kb upstream 1.0kb upstream 1000 false chr7: 35191331-35192330 Medicago truncatula
Medtr7g089800 1.0kb downstream 1.0kb downstream 6469 true chr7: 35184862-35191330 Medicago truncatula
Medtr7g089800 1.0kb downstream 1.0kb downstream 1000 false chr7: 35184862-35185861 Medicago truncatula
Medtr7g089800 2.0kb upstream 2.0kb upstream 7469 true chr7: 35185862-35193330 Medicago truncatula
Medtr7g089800 2.0kb upstream 2.0kb upstream 2000 false chr7: 35191331-35193330 Medicago truncatula
Medtr7g089800 2.0kb downstream 2.0kb downstream 7469 true chr7: 35183862-35191330 Medicago truncatula
Medtr7g089800 2.0kb downstream 2.0kb downstream 2000 false chr7: 35183862-35185861 Medicago truncatula
Medtr7g089800 5.0kb upstream 5.0kb upstream 10469 true chr7: 35185862-35196330 Medicago truncatula
Medtr7g089800 5.0kb upstream 5.0kb upstream 5000 false chr7: 35191331-35196330 Medicago truncatula
Medtr7g089800 5.0kb downstream 5.0kb downstream 10469 true chr7: 35180862-35191330 Medicago truncatula
Medtr7g089800 5.0kb downstream 5.0kb downstream 5000 false chr7: 35180862-35185861 Medicago truncatula
Medtr7g089800 10.0kb upstream 10.0kb upstream 15469 true chr7: 35185862-35201330 Medicago truncatula
Medtr7g089800 10.0kb upstream 10.0kb upstream 10000 false chr7: 35191331-35201330 Medicago truncatula
Medtr7g089800 10.0kb downstream 10.0kb downstream 15469 true chr7: 35175862-35191330 Medicago truncatula
Medtr7g089800 10.0kb downstream 10.0kb downstream 10000 false chr7: 35175862-35185861 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305197 5265 Fabidae View MSA
124069977 5270 Rosid View MSA
123742396 5271 Pentapetalae View MSA
122790944 5272 Eudicot View MSA
122048650 5273 Angiosperm View MSA
121349382 5274 Embryophyte View MSA
123426504 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.522        
cufflinks 4.539        
cufflinks 5.896        
cufflinks 5.162        
cufflinks 5.146        
cufflinks 3.176       Low
cufflinks 6.791       High
cufflinks 4.917        
cufflinks 4.294        

0 Strain