Gene : Medtr7g089770 M. truncatula Mt4.0v1
Defline:  (1 of 10) PF01535//PF13812 - PPR repeat (PPR) // Pentatricopeptide repeat domain (PPR_3) Description:  DNA-binding protein
Genomic Order:  4232 Name:  ? Medtr7g089770
Secondary Identifier:  ? PAC:31081836
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g089770 0.5kb upstream 0.5kb upstream 3906 true chr7: 35160937-35164842 Medicago truncatula
Medtr7g089770 0.5kb upstream 0.5kb upstream 500 false chr7: 35160937-35161436 Medicago truncatula
Medtr7g089770 0.5kb downstream 0.5kb downstream 3906 true chr7: 35161437-35165342 Medicago truncatula
Medtr7g089770 0.5kb downstream 0.5kb downstream 500 false chr7: 35164843-35165342 Medicago truncatula
Medtr7g089770 1.0kb upstream 1.0kb upstream 4406 true chr7: 35160437-35164842 Medicago truncatula
Medtr7g089770 1.0kb upstream 1.0kb upstream 1000 false chr7: 35160437-35161436 Medicago truncatula
Medtr7g089770 1.0kb downstream 1.0kb downstream 4406 true chr7: 35161437-35165842 Medicago truncatula
Medtr7g089770 1.0kb downstream 1.0kb downstream 1000 false chr7: 35164843-35165842 Medicago truncatula
Medtr7g089770 2.0kb upstream 2.0kb upstream 5406 true chr7: 35159437-35164842 Medicago truncatula
Medtr7g089770 2.0kb upstream 2.0kb upstream 2000 false chr7: 35159437-35161436 Medicago truncatula
Medtr7g089770 2.0kb downstream 2.0kb downstream 5406 true chr7: 35161437-35166842 Medicago truncatula
Medtr7g089770 2.0kb downstream 2.0kb downstream 2000 false chr7: 35164843-35166842 Medicago truncatula
Medtr7g089770 5.0kb upstream 5.0kb upstream 8406 true chr7: 35156437-35164842 Medicago truncatula
Medtr7g089770 5.0kb upstream 5.0kb upstream 5000 false chr7: 35156437-35161436 Medicago truncatula
Medtr7g089770 5.0kb downstream 5.0kb downstream 8406 true chr7: 35161437-35169842 Medicago truncatula
Medtr7g089770 5.0kb downstream 5.0kb downstream 5000 false chr7: 35164843-35169842 Medicago truncatula
Medtr7g089770 10.0kb upstream 10.0kb upstream 13406 true chr7: 35151437-35164842 Medicago truncatula
Medtr7g089770 10.0kb upstream 10.0kb upstream 10000 false chr7: 35151437-35161436 Medicago truncatula
Medtr7g089770 10.0kb downstream 10.0kb downstream 13406 true chr7: 35161437-35174842 Medicago truncatula
Medtr7g089770 10.0kb downstream 10.0kb downstream 10000 false chr7: 35164843-35174842 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311646 5265 Fabidae View MSA
124068490 5270 Rosid View MSA
123736856 5271 Pentapetalae View MSA
122790484 5272 Eudicot View MSA
122044724 5273 Angiosperm View MSA
121351065 5274 Embryophyte View MSA
123381996 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.66        
cufflinks 3.499        
cufflinks 4.721        
cufflinks 2.053       Low
cufflinks 8.374       High
cufflinks 1.436       Low
cufflinks 3.535        
cufflinks 4.369        
cufflinks 4.309        

0 Strain