Gene : Medtr7g089550 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12917//PTHR12917:SF20 - ASPARTYL PROTEASE DDI-RELATED Description:  ubiquitin-associated/TS-N domain protein
Genomic Order:  4215 Name:  ? Medtr7g089550
Secondary Identifier:  ? PAC:31082481
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g089550 0.5kb upstream 0.5kb upstream 6990 true chr7: 35061299-35068288 Medicago truncatula
Medtr7g089550 0.5kb upstream 0.5kb upstream 500 false chr7: 35067789-35068288 Medicago truncatula
Medtr7g089550 0.5kb downstream 0.5kb downstream 6990 true chr7: 35060799-35067788 Medicago truncatula
Medtr7g089550 0.5kb downstream 0.5kb downstream 500 false chr7: 35060799-35061298 Medicago truncatula
Medtr7g089550 1.0kb upstream 1.0kb upstream 7490 true chr7: 35061299-35068788 Medicago truncatula
Medtr7g089550 1.0kb upstream 1.0kb upstream 1000 false chr7: 35067789-35068788 Medicago truncatula
Medtr7g089550 1.0kb downstream 1.0kb downstream 7490 true chr7: 35060299-35067788 Medicago truncatula
Medtr7g089550 1.0kb downstream 1.0kb downstream 1000 false chr7: 35060299-35061298 Medicago truncatula
Medtr7g089550 2.0kb upstream 2.0kb upstream 8490 true chr7: 35061299-35069788 Medicago truncatula
Medtr7g089550 2.0kb upstream 2.0kb upstream 2000 false chr7: 35067789-35069788 Medicago truncatula
Medtr7g089550 2.0kb downstream 2.0kb downstream 8490 true chr7: 35059299-35067788 Medicago truncatula
Medtr7g089550 2.0kb downstream 2.0kb downstream 2000 false chr7: 35059299-35061298 Medicago truncatula
Medtr7g089550 5.0kb upstream 5.0kb upstream 11490 true chr7: 35061299-35072788 Medicago truncatula
Medtr7g089550 5.0kb upstream 5.0kb upstream 5000 false chr7: 35067789-35072788 Medicago truncatula
Medtr7g089550 5.0kb downstream 5.0kb downstream 11490 true chr7: 35056299-35067788 Medicago truncatula
Medtr7g089550 5.0kb downstream 5.0kb downstream 5000 false chr7: 35056299-35061298 Medicago truncatula
Medtr7g089550 10.0kb upstream 10.0kb upstream 16490 true chr7: 35061299-35077788 Medicago truncatula
Medtr7g089550 10.0kb upstream 10.0kb upstream 10000 false chr7: 35067789-35077788 Medicago truncatula
Medtr7g089550 10.0kb downstream 10.0kb downstream 16490 true chr7: 35051299-35067788 Medicago truncatula
Medtr7g089550 10.0kb downstream 10.0kb downstream 10000 false chr7: 35051299-35061298 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305067 5265 Fabidae View MSA
124061848 5270 Rosid View MSA
123737894 5271 Pentapetalae View MSA
122788479 5272 Eudicot View MSA
122046571 5273 Angiosperm View MSA
121349564 5274 Embryophyte View MSA
123424365 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.615        
cufflinks 6.166        
cufflinks 5.937        
cufflinks 11.057     High High
cufflinks 5.4        
cufflinks 5.184        
cufflinks 7.435        
cufflinks 5.684        
cufflinks 5.652        

0 Strain