Gene : Medtr7g089520 M. truncatula Mt4.0v1
Description:  transmembrane protein, putative Genomic Order:  4212
Name:  ? Medtr7g089520 Secondary Identifier:  ? PAC:31081137
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g089520 0.5kb upstream 0.5kb upstream 1507 true chr7: 35052268-35053774 Medicago truncatula
Medtr7g089520 0.5kb upstream 0.5kb upstream 500 false chr7: 35053275-35053774 Medicago truncatula
Medtr7g089520 0.5kb downstream 0.5kb downstream 1507 true chr7: 35051768-35053274 Medicago truncatula
Medtr7g089520 0.5kb downstream 0.5kb downstream 500 false chr7: 35051768-35052267 Medicago truncatula
Medtr7g089520 1.0kb upstream 1.0kb upstream 2007 true chr7: 35052268-35054274 Medicago truncatula
Medtr7g089520 1.0kb upstream 1.0kb upstream 1000 false chr7: 35053275-35054274 Medicago truncatula
Medtr7g089520 1.0kb downstream 1.0kb downstream 2007 true chr7: 35051268-35053274 Medicago truncatula
Medtr7g089520 1.0kb downstream 1.0kb downstream 1000 false chr7: 35051268-35052267 Medicago truncatula
Medtr7g089520 2.0kb upstream 2.0kb upstream 3007 true chr7: 35052268-35055274 Medicago truncatula
Medtr7g089520 2.0kb upstream 2.0kb upstream 2000 false chr7: 35053275-35055274 Medicago truncatula
Medtr7g089520 2.0kb downstream 2.0kb downstream 3007 true chr7: 35050268-35053274 Medicago truncatula
Medtr7g089520 2.0kb downstream 2.0kb downstream 2000 false chr7: 35050268-35052267 Medicago truncatula
Medtr7g089520 5.0kb upstream 5.0kb upstream 6007 true chr7: 35052268-35058274 Medicago truncatula
Medtr7g089520 5.0kb upstream 5.0kb upstream 5000 false chr7: 35053275-35058274 Medicago truncatula
Medtr7g089520 5.0kb downstream 5.0kb downstream 6007 true chr7: 35047268-35053274 Medicago truncatula
Medtr7g089520 5.0kb downstream 5.0kb downstream 5000 false chr7: 35047268-35052267 Medicago truncatula
Medtr7g089520 10.0kb upstream 10.0kb upstream 11007 true chr7: 35052268-35063274 Medicago truncatula
Medtr7g089520 10.0kb upstream 10.0kb upstream 10000 false chr7: 35053275-35063274 Medicago truncatula
Medtr7g089520 10.0kb downstream 10.0kb downstream 11007 true chr7: 35042268-35053274 Medicago truncatula
Medtr7g089520 10.0kb downstream 10.0kb downstream 10000 false chr7: 35042268-35052267 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121629137 5273 Angiosperm Singleton cluster - no MSA
122267445 5265 Fabidae Singleton cluster - no MSA
124008385 5270 Rosid Singleton cluster - no MSA
123582386 5271 Pentapetalae Singleton cluster - no MSA
122617090 5272 Eudicot Singleton cluster - no MSA
120901241 5274 Embryophyte Singleton cluster - no MSA
122941896 5275 Viridiplantae Singleton cluster - no MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.265       Low
cufflinks 10.253     High  
cufflinks 16.819     High  
cufflinks 37.388     High High
cufflinks 14.025     High  
cufflinks 48.515     High High
cufflinks 13.138     High  
cufflinks 12.665     High  
cufflinks 13.755     High  

0 Strain