Gene : Medtr7g090340 M. truncatula Mt4.0v1
Defline:  (1 of 599) PF13041 - PPR repeat family (PPR_2) Description:  PPR containing plant-like protein
Genomic Order:  4282 Name:  ? Medtr7g090340
Secondary Identifier:  ? PAC:31083648
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g090340 0.5kb upstream 0.5kb upstream 2228 true chr7: 35533569-35535796 Medicago truncatula
Medtr7g090340 0.5kb upstream 0.5kb upstream 500 false chr7: 35533569-35534068 Medicago truncatula
Medtr7g090340 0.5kb downstream 0.5kb downstream 2228 true chr7: 35534069-35536296 Medicago truncatula
Medtr7g090340 0.5kb downstream 0.5kb downstream 500 false chr7: 35535797-35536296 Medicago truncatula
Medtr7g090340 1.0kb upstream 1.0kb upstream 2728 true chr7: 35533069-35535796 Medicago truncatula
Medtr7g090340 1.0kb upstream 1.0kb upstream 1000 false chr7: 35533069-35534068 Medicago truncatula
Medtr7g090340 1.0kb downstream 1.0kb downstream 2728 true chr7: 35534069-35536796 Medicago truncatula
Medtr7g090340 1.0kb downstream 1.0kb downstream 1000 false chr7: 35535797-35536796 Medicago truncatula
Medtr7g090340 2.0kb upstream 2.0kb upstream 3728 true chr7: 35532069-35535796 Medicago truncatula
Medtr7g090340 2.0kb upstream 2.0kb upstream 2000 false chr7: 35532069-35534068 Medicago truncatula
Medtr7g090340 2.0kb downstream 2.0kb downstream 3728 true chr7: 35534069-35537796 Medicago truncatula
Medtr7g090340 2.0kb downstream 2.0kb downstream 2000 false chr7: 35535797-35537796 Medicago truncatula
Medtr7g090340 5.0kb upstream 5.0kb upstream 6728 true chr7: 35529069-35535796 Medicago truncatula
Medtr7g090340 5.0kb upstream 5.0kb upstream 5000 false chr7: 35529069-35534068 Medicago truncatula
Medtr7g090340 5.0kb downstream 5.0kb downstream 6728 true chr7: 35534069-35540796 Medicago truncatula
Medtr7g090340 5.0kb downstream 5.0kb downstream 5000 false chr7: 35535797-35540796 Medicago truncatula
Medtr7g090340 10.0kb upstream 10.0kb upstream 11728 true chr7: 35524069-35535796 Medicago truncatula
Medtr7g090340 10.0kb upstream 10.0kb upstream 10000 false chr7: 35524069-35534068 Medicago truncatula
Medtr7g090340 10.0kb downstream 10.0kb downstream 11728 true chr7: 35534069-35545796 Medicago truncatula
Medtr7g090340 10.0kb downstream 10.0kb downstream 10000 false chr7: 35535797-35545796 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309091 5265 Fabidae View MSA
124073519 5270 Rosid View MSA
123739768 5271 Pentapetalae View MSA
122797794 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.341        
cufflinks 2.075       High
cufflinks 0.941        
cufflinks 0.184       Low
cufflinks 2.226       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.443        
cufflinks 0.999        
cufflinks 0.546        

0 Strain