Gene : Medtr7g090160 M. truncatula Mt4.0v1
Defline:  (1 of 2) 1.5.1.2 - Pyrroline-5-carboxylate reductase / P5CR Description:  pyrroline-5-carboxylate reductase
Genomic Order:  4261 Name:  ? Medtr7g090160
Secondary Identifier:  ? PAC:31079844
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula ARG-PRO-PWY Medicago truncatula pathologic  
Mtruncatula PROSYN-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g090160 0.5kb upstream 0.5kb upstream 4817 true chr7: 35388752-35393568 Medicago truncatula
Medtr7g090160 0.5kb upstream 0.5kb upstream 500 false chr7: 35393069-35393568 Medicago truncatula
Medtr7g090160 0.5kb downstream 0.5kb downstream 4817 true chr7: 35388252-35393068 Medicago truncatula
Medtr7g090160 0.5kb downstream 0.5kb downstream 500 false chr7: 35388252-35388751 Medicago truncatula
Medtr7g090160 1.0kb upstream 1.0kb upstream 5317 true chr7: 35388752-35394068 Medicago truncatula
Medtr7g090160 1.0kb upstream 1.0kb upstream 1000 false chr7: 35393069-35394068 Medicago truncatula
Medtr7g090160 1.0kb downstream 1.0kb downstream 5317 true chr7: 35387752-35393068 Medicago truncatula
Medtr7g090160 1.0kb downstream 1.0kb downstream 1000 false chr7: 35387752-35388751 Medicago truncatula
Medtr7g090160 2.0kb upstream 2.0kb upstream 6317 true chr7: 35388752-35395068 Medicago truncatula
Medtr7g090160 2.0kb upstream 2.0kb upstream 2000 false chr7: 35393069-35395068 Medicago truncatula
Medtr7g090160 2.0kb downstream 2.0kb downstream 6317 true chr7: 35386752-35393068 Medicago truncatula
Medtr7g090160 2.0kb downstream 2.0kb downstream 2000 false chr7: 35386752-35388751 Medicago truncatula
Medtr7g090160 5.0kb upstream 5.0kb upstream 9317 true chr7: 35388752-35398068 Medicago truncatula
Medtr7g090160 5.0kb upstream 5.0kb upstream 5000 false chr7: 35393069-35398068 Medicago truncatula
Medtr7g090160 5.0kb downstream 5.0kb downstream 9317 true chr7: 35383752-35393068 Medicago truncatula
Medtr7g090160 5.0kb downstream 5.0kb downstream 5000 false chr7: 35383752-35388751 Medicago truncatula
Medtr7g090160 10.0kb upstream 10.0kb upstream 14317 true chr7: 35388752-35403068 Medicago truncatula
Medtr7g090160 10.0kb upstream 10.0kb upstream 10000 false chr7: 35393069-35403068 Medicago truncatula
Medtr7g090160 10.0kb downstream 10.0kb downstream 14317 true chr7: 35378752-35393068 Medicago truncatula
Medtr7g090160 10.0kb downstream 10.0kb downstream 10000 false chr7: 35378752-35388751 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305300 5265 Fabidae View MSA
124061027 5270 Rosid View MSA
123740492 5271 Pentapetalae View MSA
122788937 5272 Eudicot View MSA
122043656 5273 Angiosperm View MSA
123428906 5275 Viridiplantae View MSA
121346927 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.015       Low
cufflinks 2.366       High
cufflinks 1.063        
cufflinks 2.599       High
cufflinks 1.451        
cufflinks 0.886       Low
cufflinks 1.35        
cufflinks 1.684        
cufflinks 2.521       High

0 Strain