Gene : Medtr7g090220 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10535:SF2 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 5A-RELATED Description:  DNA-directed RNA polymerase II
Genomic Order:  4267 Name:  ? Medtr7g090220
Secondary Identifier:  ? PAC:31080386
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g090220 0.5kb upstream 0.5kb upstream 4932 true chr7: 35412434-35417365 Medicago truncatula
Medtr7g090220 0.5kb upstream 0.5kb upstream 500 false chr7: 35416866-35417365 Medicago truncatula
Medtr7g090220 0.5kb downstream 0.5kb downstream 4932 true chr7: 35411934-35416865 Medicago truncatula
Medtr7g090220 0.5kb downstream 0.5kb downstream 500 false chr7: 35411934-35412433 Medicago truncatula
Medtr7g090220 1.0kb upstream 1.0kb upstream 5432 true chr7: 35412434-35417865 Medicago truncatula
Medtr7g090220 1.0kb upstream 1.0kb upstream 1000 false chr7: 35416866-35417865 Medicago truncatula
Medtr7g090220 1.0kb downstream 1.0kb downstream 5432 true chr7: 35411434-35416865 Medicago truncatula
Medtr7g090220 1.0kb downstream 1.0kb downstream 1000 false chr7: 35411434-35412433 Medicago truncatula
Medtr7g090220 2.0kb upstream 2.0kb upstream 6432 true chr7: 35412434-35418865 Medicago truncatula
Medtr7g090220 2.0kb upstream 2.0kb upstream 2000 false chr7: 35416866-35418865 Medicago truncatula
Medtr7g090220 2.0kb downstream 2.0kb downstream 6432 true chr7: 35410434-35416865 Medicago truncatula
Medtr7g090220 2.0kb downstream 2.0kb downstream 2000 false chr7: 35410434-35412433 Medicago truncatula
Medtr7g090220 5.0kb upstream 5.0kb upstream 9432 true chr7: 35412434-35421865 Medicago truncatula
Medtr7g090220 5.0kb upstream 5.0kb upstream 5000 false chr7: 35416866-35421865 Medicago truncatula
Medtr7g090220 5.0kb downstream 5.0kb downstream 9432 true chr7: 35407434-35416865 Medicago truncatula
Medtr7g090220 5.0kb downstream 5.0kb downstream 5000 false chr7: 35407434-35412433 Medicago truncatula
Medtr7g090220 10.0kb upstream 10.0kb upstream 14432 true chr7: 35412434-35426865 Medicago truncatula
Medtr7g090220 10.0kb upstream 10.0kb upstream 10000 false chr7: 35416866-35426865 Medicago truncatula
Medtr7g090220 10.0kb downstream 10.0kb downstream 14432 true chr7: 35402434-35416865 Medicago truncatula
Medtr7g090220 10.0kb downstream 10.0kb downstream 10000 false chr7: 35402434-35412433 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302329 5265 Fabidae View MSA
124067082 5270 Rosid View MSA
123741650 5271 Pentapetalae View MSA
122792617 5272 Eudicot View MSA
122051300 5273 Angiosperm View MSA
121352511 5274 Embryophyte View MSA
123382830 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.099        
cufflinks 3.163        
cufflinks 4.296       High
cufflinks 1.897       Low
cufflinks 4.11        
cufflinks 2.214       Low
cufflinks 4.1        
cufflinks 3.424        
cufflinks 3.481        

0 Strain