Gene : Medtr7g092070 M. truncatula Mt4.0v1
Defline:  (1 of 4) PF00642//PF12796 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) // Ankyrin repeats (3 copies) (Ank_2) Description:  ARM repeat CCCH-type zinc finger protein
Genomic Order:  4407 Name:  ? Medtr7g092070
Secondary Identifier:  ? PAC:31077185
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g092070 0.5kb upstream 0.5kb upstream 4388 true chr7: 36453863-36458250 Medicago truncatula
Medtr7g092070 0.5kb upstream 0.5kb upstream 500 false chr7: 36453863-36454362 Medicago truncatula
Medtr7g092070 0.5kb downstream 0.5kb downstream 4388 true chr7: 36454363-36458750 Medicago truncatula
Medtr7g092070 0.5kb downstream 0.5kb downstream 500 false chr7: 36458251-36458750 Medicago truncatula
Medtr7g092070 1.0kb upstream 1.0kb upstream 4888 true chr7: 36453363-36458250 Medicago truncatula
Medtr7g092070 1.0kb upstream 1.0kb upstream 1000 false chr7: 36453363-36454362 Medicago truncatula
Medtr7g092070 1.0kb downstream 1.0kb downstream 4888 true chr7: 36454363-36459250 Medicago truncatula
Medtr7g092070 1.0kb downstream 1.0kb downstream 1000 false chr7: 36458251-36459250 Medicago truncatula
Medtr7g092070 2.0kb upstream 2.0kb upstream 5888 true chr7: 36452363-36458250 Medicago truncatula
Medtr7g092070 2.0kb upstream 2.0kb upstream 2000 false chr7: 36452363-36454362 Medicago truncatula
Medtr7g092070 2.0kb downstream 2.0kb downstream 5888 true chr7: 36454363-36460250 Medicago truncatula
Medtr7g092070 2.0kb downstream 2.0kb downstream 2000 false chr7: 36458251-36460250 Medicago truncatula
Medtr7g092070 5.0kb upstream 5.0kb upstream 8888 true chr7: 36449363-36458250 Medicago truncatula
Medtr7g092070 5.0kb upstream 5.0kb upstream 5000 false chr7: 36449363-36454362 Medicago truncatula
Medtr7g092070 5.0kb downstream 5.0kb downstream 8888 true chr7: 36454363-36463250 Medicago truncatula
Medtr7g092070 5.0kb downstream 5.0kb downstream 5000 false chr7: 36458251-36463250 Medicago truncatula
Medtr7g092070 10.0kb upstream 10.0kb upstream 13888 true chr7: 36444363-36458250 Medicago truncatula
Medtr7g092070 10.0kb upstream 10.0kb upstream 10000 false chr7: 36444363-36454362 Medicago truncatula
Medtr7g092070 10.0kb downstream 10.0kb downstream 13888 true chr7: 36454363-36468250 Medicago truncatula
Medtr7g092070 10.0kb downstream 10.0kb downstream 10000 false chr7: 36458251-36468250 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314270 5265 Fabidae View MSA
124070984 5270 Rosid View MSA
123746400 5271 Pentapetalae View MSA
122787606 5272 Eudicot View MSA
122046013 5273 Angiosperm View MSA
123429052 5275 Viridiplantae View MSA
121351105 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.589     High High
cufflinks 16.13     High  
cufflinks 12.788     High  
cufflinks 26.698     High High
cufflinks 13.143     High  
cufflinks 7.4       Low
cufflinks 14.299     High  
cufflinks 12.277     High  
cufflinks 20.455     High  

0 Strain