Gene : Medtr7g093160 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR33493:SF2 - LATE EMBRYOGENESIS ABUNDANT PROTEIN 4-5 Description:  seed maturation protein
Genomic Order:  4489 Name:  ? Medtr7g093160
Secondary Identifier:  ? PAC:31077001
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g093160 0.5kb upstream 0.5kb upstream 2014 true chr7: 36993553-36995566 Medicago truncatula
Medtr7g093160 0.5kb upstream 0.5kb upstream 500 false chr7: 36995067-36995566 Medicago truncatula
Medtr7g093160 0.5kb downstream 0.5kb downstream 2014 true chr7: 36993053-36995066 Medicago truncatula
Medtr7g093160 0.5kb downstream 0.5kb downstream 500 false chr7: 36993053-36993552 Medicago truncatula
Medtr7g093160 1.0kb upstream 1.0kb upstream 2514 true chr7: 36993553-36996066 Medicago truncatula
Medtr7g093160 1.0kb upstream 1.0kb upstream 1000 false chr7: 36995067-36996066 Medicago truncatula
Medtr7g093160 1.0kb downstream 1.0kb downstream 2514 true chr7: 36992553-36995066 Medicago truncatula
Medtr7g093160 1.0kb downstream 1.0kb downstream 1000 false chr7: 36992553-36993552 Medicago truncatula
Medtr7g093160 2.0kb upstream 2.0kb upstream 3514 true chr7: 36993553-36997066 Medicago truncatula
Medtr7g093160 2.0kb upstream 2.0kb upstream 2000 false chr7: 36995067-36997066 Medicago truncatula
Medtr7g093160 2.0kb downstream 2.0kb downstream 3514 true chr7: 36991553-36995066 Medicago truncatula
Medtr7g093160 2.0kb downstream 2.0kb downstream 2000 false chr7: 36991553-36993552 Medicago truncatula
Medtr7g093160 5.0kb upstream 5.0kb upstream 6514 true chr7: 36993553-37000066 Medicago truncatula
Medtr7g093160 5.0kb upstream 5.0kb upstream 5000 false chr7: 36995067-37000066 Medicago truncatula
Medtr7g093160 5.0kb downstream 5.0kb downstream 6514 true chr7: 36988553-36995066 Medicago truncatula
Medtr7g093160 5.0kb downstream 5.0kb downstream 5000 false chr7: 36988553-36993552 Medicago truncatula
Medtr7g093160 10.0kb upstream 10.0kb upstream 11514 true chr7: 36993553-37005066 Medicago truncatula
Medtr7g093160 10.0kb upstream 10.0kb upstream 10000 false chr7: 36995067-37005066 Medicago truncatula
Medtr7g093160 10.0kb downstream 10.0kb downstream 11514 true chr7: 36983553-36995066 Medicago truncatula
Medtr7g093160 10.0kb downstream 10.0kb downstream 10000 false chr7: 36983553-36993552 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297101 5265 Fabidae View MSA
124073958 5270 Rosid View MSA
123749159 5271 Pentapetalae View MSA
122794913 5272 Eudicot View MSA
122046443 5273 Angiosperm View MSA
121349982 5274 Embryophyte View MSA
123381528 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.019     Low Low
cufflinks 0.255       High
cufflinks 0.029     Low  
cufflinks 0.206        
cufflinks 0.101        
cufflinks 0.04     Low  
cufflinks 0.026     Low Low
cufflinks 0.174        
cufflinks 0.276       High

0 Strain