Gene : Medtr7g093140 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR33493:SF2 - LATE EMBRYOGENESIS ABUNDANT PROTEIN 4-5 Description:  late embryogenesis abundant protein
Genomic Order:  4487 Name:  ? Medtr7g093140
Secondary Identifier:  ? PAC:31077047
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g093140 0.5kb upstream 0.5kb upstream 1881 true chr7: 36987950-36989830 Medicago truncatula
Medtr7g093140 0.5kb upstream 0.5kb upstream 500 false chr7: 36989331-36989830 Medicago truncatula
Medtr7g093140 0.5kb downstream 0.5kb downstream 1881 true chr7: 36987450-36989330 Medicago truncatula
Medtr7g093140 0.5kb downstream 0.5kb downstream 500 false chr7: 36987450-36987949 Medicago truncatula
Medtr7g093140 1.0kb upstream 1.0kb upstream 2381 true chr7: 36987950-36990330 Medicago truncatula
Medtr7g093140 1.0kb upstream 1.0kb upstream 1000 false chr7: 36989331-36990330 Medicago truncatula
Medtr7g093140 1.0kb downstream 1.0kb downstream 2381 true chr7: 36986950-36989330 Medicago truncatula
Medtr7g093140 1.0kb downstream 1.0kb downstream 1000 false chr7: 36986950-36987949 Medicago truncatula
Medtr7g093140 2.0kb upstream 2.0kb upstream 3381 true chr7: 36987950-36991330 Medicago truncatula
Medtr7g093140 2.0kb upstream 2.0kb upstream 2000 false chr7: 36989331-36991330 Medicago truncatula
Medtr7g093140 2.0kb downstream 2.0kb downstream 3381 true chr7: 36985950-36989330 Medicago truncatula
Medtr7g093140 2.0kb downstream 2.0kb downstream 2000 false chr7: 36985950-36987949 Medicago truncatula
Medtr7g093140 5.0kb upstream 5.0kb upstream 6381 true chr7: 36987950-36994330 Medicago truncatula
Medtr7g093140 5.0kb upstream 5.0kb upstream 5000 false chr7: 36989331-36994330 Medicago truncatula
Medtr7g093140 5.0kb downstream 5.0kb downstream 6381 true chr7: 36982950-36989330 Medicago truncatula
Medtr7g093140 5.0kb downstream 5.0kb downstream 5000 false chr7: 36982950-36987949 Medicago truncatula
Medtr7g093140 10.0kb upstream 10.0kb upstream 11381 true chr7: 36987950-36999330 Medicago truncatula
Medtr7g093140 10.0kb upstream 10.0kb upstream 10000 false chr7: 36989331-36999330 Medicago truncatula
Medtr7g093140 10.0kb downstream 10.0kb downstream 11381 true chr7: 36977950-36989330 Medicago truncatula
Medtr7g093140 10.0kb downstream 10.0kb downstream 10000 false chr7: 36977950-36987949 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297101 5265 Fabidae View MSA
124073958 5270 Rosid View MSA
123749159 5271 Pentapetalae View MSA
122794913 5272 Eudicot View MSA
122046443 5273 Angiosperm View MSA
121349982 5274 Embryophyte View MSA
123381528 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.041     Low Low
cufflinks 18.538     High  
cufflinks 4.584        
cufflinks 11.452     High  
cufflinks 6.418        
cufflinks 2.371        
cufflinks 1.674        
cufflinks 11.529     High  
cufflinks 5.061        

0 Strain