Gene : Medtr7g093200 M. truncatula Mt4.0v1
Defline:  (1 of 2) 1.14.19.6 - Delta(12)-fatty-acid desaturase / Oleoyl-CoA Delta(12) desaturase Description:  microsomal omega-3 fatty acid desaturase
Genomic Order:  4491 Name:  ? Medtr7g093200
Secondary Identifier:  ? PAC:31084114
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5995 Medicago truncatula pathologic  
Mtruncatula PWY-762 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g093200 0.5kb upstream 0.5kb upstream 6076 true chr7: 37015152-37021227 Medicago truncatula
Medtr7g093200 0.5kb upstream 0.5kb upstream 500 false chr7: 37015152-37015651 Medicago truncatula
Medtr7g093200 0.5kb downstream 0.5kb downstream 6076 true chr7: 37015652-37021727 Medicago truncatula
Medtr7g093200 0.5kb downstream 0.5kb downstream 500 false chr7: 37021228-37021727 Medicago truncatula
Medtr7g093200 1.0kb upstream 1.0kb upstream 6576 true chr7: 37014652-37021227 Medicago truncatula
Medtr7g093200 1.0kb upstream 1.0kb upstream 1000 false chr7: 37014652-37015651 Medicago truncatula
Medtr7g093200 1.0kb downstream 1.0kb downstream 6576 true chr7: 37015652-37022227 Medicago truncatula
Medtr7g093200 1.0kb downstream 1.0kb downstream 1000 false chr7: 37021228-37022227 Medicago truncatula
Medtr7g093200 2.0kb upstream 2.0kb upstream 7576 true chr7: 37013652-37021227 Medicago truncatula
Medtr7g093200 2.0kb upstream 2.0kb upstream 2000 false chr7: 37013652-37015651 Medicago truncatula
Medtr7g093200 2.0kb downstream 2.0kb downstream 7576 true chr7: 37015652-37023227 Medicago truncatula
Medtr7g093200 2.0kb downstream 2.0kb downstream 2000 false chr7: 37021228-37023227 Medicago truncatula
Medtr7g093200 5.0kb upstream 5.0kb upstream 10576 true chr7: 37010652-37021227 Medicago truncatula
Medtr7g093200 5.0kb upstream 5.0kb upstream 5000 false chr7: 37010652-37015651 Medicago truncatula
Medtr7g093200 5.0kb downstream 5.0kb downstream 10576 true chr7: 37015652-37026227 Medicago truncatula
Medtr7g093200 5.0kb downstream 5.0kb downstream 5000 false chr7: 37021228-37026227 Medicago truncatula
Medtr7g093200 10.0kb upstream 10.0kb upstream 15576 true chr7: 37005652-37021227 Medicago truncatula
Medtr7g093200 10.0kb upstream 10.0kb upstream 10000 false chr7: 37005652-37015651 Medicago truncatula
Medtr7g093200 10.0kb downstream 10.0kb downstream 15576 true chr7: 37015652-37031227 Medicago truncatula
Medtr7g093200 10.0kb downstream 10.0kb downstream 10000 false chr7: 37021228-37031227 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041215 5273 Angiosperm View MSA
122299499 5265 Fabidae View MSA
124074119 5270 Rosid View MSA
123747966 5271 Pentapetalae View MSA
122789327 5272 Eudicot View MSA
121347269 5274 Embryophyte View MSA
123426688 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.93     High  
cufflinks 15.793     High  
cufflinks 5.644       Low
cufflinks 168.952     High High
cufflinks 8.891        
cufflinks 53.567     High  
cufflinks 39.444     High  
cufflinks 7.075       Low
cufflinks 74.825     High  

0 Strain