Gene : Medtr7g092720 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR11700//PTHR11700:SF10 - 30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER Description:  40S ribosomal protein S20-2
Genomic Order:  4454 Name:  ? Medtr7g092720
Secondary Identifier:  ? PAC:31084178
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g092720 0.5kb upstream 0.5kb upstream 2470 true chr7: 36774739-36777208 Medicago truncatula
Medtr7g092720 0.5kb upstream 0.5kb upstream 500 false chr7: 36774739-36775238 Medicago truncatula
Medtr7g092720 0.5kb downstream 0.5kb downstream 2470 true chr7: 36775239-36777708 Medicago truncatula
Medtr7g092720 0.5kb downstream 0.5kb downstream 500 false chr7: 36777209-36777708 Medicago truncatula
Medtr7g092720 1.0kb upstream 1.0kb upstream 2970 true chr7: 36774239-36777208 Medicago truncatula
Medtr7g092720 1.0kb upstream 1.0kb upstream 1000 false chr7: 36774239-36775238 Medicago truncatula
Medtr7g092720 1.0kb downstream 1.0kb downstream 2970 true chr7: 36775239-36778208 Medicago truncatula
Medtr7g092720 1.0kb downstream 1.0kb downstream 1000 false chr7: 36777209-36778208 Medicago truncatula
Medtr7g092720 2.0kb upstream 2.0kb upstream 3970 true chr7: 36773239-36777208 Medicago truncatula
Medtr7g092720 2.0kb upstream 2.0kb upstream 2000 false chr7: 36773239-36775238 Medicago truncatula
Medtr7g092720 2.0kb downstream 2.0kb downstream 3970 true chr7: 36775239-36779208 Medicago truncatula
Medtr7g092720 2.0kb downstream 2.0kb downstream 2000 false chr7: 36777209-36779208 Medicago truncatula
Medtr7g092720 5.0kb upstream 5.0kb upstream 6970 true chr7: 36770239-36777208 Medicago truncatula
Medtr7g092720 5.0kb upstream 5.0kb upstream 5000 false chr7: 36770239-36775238 Medicago truncatula
Medtr7g092720 5.0kb downstream 5.0kb downstream 6970 true chr7: 36775239-36782208 Medicago truncatula
Medtr7g092720 5.0kb downstream 5.0kb downstream 5000 false chr7: 36777209-36782208 Medicago truncatula
Medtr7g092720 10.0kb upstream 10.0kb upstream 11970 true chr7: 36765239-36777208 Medicago truncatula
Medtr7g092720 10.0kb upstream 10.0kb upstream 10000 false chr7: 36765239-36775238 Medicago truncatula
Medtr7g092720 10.0kb downstream 10.0kb downstream 11970 true chr7: 36775239-36787208 Medicago truncatula
Medtr7g092720 10.0kb downstream 10.0kb downstream 10000 false chr7: 36777209-36787208 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309868 5265 Fabidae View MSA
124068920 5270 Rosid View MSA
123743222 5271 Pentapetalae View MSA
122791885 5272 Eudicot View MSA
122044190 5273 Angiosperm View MSA
121349858 5274 Embryophyte View MSA
123426171 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 48.273     High  
cufflinks 32.368     High  
cufflinks 29.666     High Low
cufflinks 305.93     High High
cufflinks 50.134     High  
cufflinks 504.607     High High
cufflinks 100.599     High  
cufflinks 37.759     High  
cufflinks 159.533     High  

0 Strain