Gene : Medtr7g083240 M. truncatula Mt4.0v1
Defline:  (1 of 7) PF03114 - BAR domain Description:  hydroxyproline-rich glycoprotein family protein
Genomic Order:  3789 Name:  ? Medtr7g083240
Secondary Identifier:  ? PAC:31078297
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g083240 0.5kb upstream 0.5kb upstream 8554 true chr7: 31995947-32004500 Medicago truncatula
Medtr7g083240 0.5kb upstream 0.5kb upstream 500 false chr7: 32004001-32004500 Medicago truncatula
Medtr7g083240 0.5kb downstream 0.5kb downstream 8554 true chr7: 31995447-32004000 Medicago truncatula
Medtr7g083240 0.5kb downstream 0.5kb downstream 500 false chr7: 31995447-31995946 Medicago truncatula
Medtr7g083240 1.0kb upstream 1.0kb upstream 9054 true chr7: 31995947-32005000 Medicago truncatula
Medtr7g083240 1.0kb upstream 1.0kb upstream 1000 false chr7: 32004001-32005000 Medicago truncatula
Medtr7g083240 1.0kb downstream 1.0kb downstream 9054 true chr7: 31994947-32004000 Medicago truncatula
Medtr7g083240 1.0kb downstream 1.0kb downstream 1000 false chr7: 31994947-31995946 Medicago truncatula
Medtr7g083240 2.0kb upstream 2.0kb upstream 10054 true chr7: 31995947-32006000 Medicago truncatula
Medtr7g083240 2.0kb upstream 2.0kb upstream 2000 false chr7: 32004001-32006000 Medicago truncatula
Medtr7g083240 2.0kb downstream 2.0kb downstream 10054 true chr7: 31993947-32004000 Medicago truncatula
Medtr7g083240 2.0kb downstream 2.0kb downstream 2000 false chr7: 31993947-31995946 Medicago truncatula
Medtr7g083240 5.0kb upstream 5.0kb upstream 13054 true chr7: 31995947-32009000 Medicago truncatula
Medtr7g083240 5.0kb upstream 5.0kb upstream 5000 false chr7: 32004001-32009000 Medicago truncatula
Medtr7g083240 5.0kb downstream 5.0kb downstream 13054 true chr7: 31990947-32004000 Medicago truncatula
Medtr7g083240 5.0kb downstream 5.0kb downstream 5000 false chr7: 31990947-31995946 Medicago truncatula
Medtr7g083240 10.0kb upstream 10.0kb upstream 18054 true chr7: 31995947-32014000 Medicago truncatula
Medtr7g083240 10.0kb upstream 10.0kb upstream 10000 false chr7: 32004001-32014000 Medicago truncatula
Medtr7g083240 10.0kb downstream 10.0kb downstream 18054 true chr7: 31985947-32004000 Medicago truncatula
Medtr7g083240 10.0kb downstream 10.0kb downstream 10000 false chr7: 31985947-31995946 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300176 5265 Fabidae View MSA
124070616 5270 Rosid View MSA
123745722 5271 Pentapetalae View MSA
122786878 5272 Eudicot View MSA
122041909 5273 Angiosperm View MSA
121348701 5274 Embryophyte View MSA
123380980 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.034        
cufflinks 1.02        
cufflinks 0.963        
cufflinks 0.874        
cufflinks 1.058        
cufflinks 0.268       Low
cufflinks 0.788        
cufflinks 0.846        
cufflinks 0.792        

0 Strain