Gene : Medtr7g083030 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11538:SF41 - PHENYLALANINE--TRNA LIGASE, MITOCHONDRIAL Description:  phenylalanyl-tRNA synthetase
Genomic Order:  3772 Name:  ? Medtr7g083030
Secondary Identifier:  ? PAC:31078260
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula TRNA-CHARGING-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g083030 0.5kb upstream 0.5kb upstream 8889 true chr7: 31863554-31872442 Medicago truncatula
Medtr7g083030 0.5kb upstream 0.5kb upstream 500 false chr7: 31871943-31872442 Medicago truncatula
Medtr7g083030 0.5kb downstream 0.5kb downstream 8889 true chr7: 31863054-31871942 Medicago truncatula
Medtr7g083030 0.5kb downstream 0.5kb downstream 500 false chr7: 31863054-31863553 Medicago truncatula
Medtr7g083030 1.0kb upstream 1.0kb upstream 9389 true chr7: 31863554-31872942 Medicago truncatula
Medtr7g083030 1.0kb upstream 1.0kb upstream 1000 false chr7: 31871943-31872942 Medicago truncatula
Medtr7g083030 1.0kb downstream 1.0kb downstream 9389 true chr7: 31862554-31871942 Medicago truncatula
Medtr7g083030 1.0kb downstream 1.0kb downstream 1000 false chr7: 31862554-31863553 Medicago truncatula
Medtr7g083030 2.0kb upstream 2.0kb upstream 10389 true chr7: 31863554-31873942 Medicago truncatula
Medtr7g083030 2.0kb upstream 2.0kb upstream 2000 false chr7: 31871943-31873942 Medicago truncatula
Medtr7g083030 2.0kb downstream 2.0kb downstream 10389 true chr7: 31861554-31871942 Medicago truncatula
Medtr7g083030 2.0kb downstream 2.0kb downstream 2000 false chr7: 31861554-31863553 Medicago truncatula
Medtr7g083030 5.0kb upstream 5.0kb upstream 13389 true chr7: 31863554-31876942 Medicago truncatula
Medtr7g083030 5.0kb upstream 5.0kb upstream 5000 false chr7: 31871943-31876942 Medicago truncatula
Medtr7g083030 5.0kb downstream 5.0kb downstream 13389 true chr7: 31858554-31871942 Medicago truncatula
Medtr7g083030 5.0kb downstream 5.0kb downstream 5000 false chr7: 31858554-31863553 Medicago truncatula
Medtr7g083030 10.0kb upstream 10.0kb upstream 18389 true chr7: 31863554-31881942 Medicago truncatula
Medtr7g083030 10.0kb upstream 10.0kb upstream 10000 false chr7: 31871943-31881942 Medicago truncatula
Medtr7g083030 10.0kb downstream 10.0kb downstream 18389 true chr7: 31853554-31871942 Medicago truncatula
Medtr7g083030 10.0kb downstream 10.0kb downstream 10000 false chr7: 31853554-31863553 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299382 5265 Fabidae View MSA
124068878 5270 Rosid View MSA
123737426 5271 Pentapetalae View MSA
122793122 5272 Eudicot View MSA
122044413 5273 Angiosperm View MSA
121344364 5274 Embryophyte View MSA
123424081 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.392        
cufflinks 2.478        
cufflinks 1.67        
cufflinks 0.14        
cufflinks 3.528       High
cufflinks 0.037     Low Low
cufflinks 0.375        
cufflinks 2.009        
cufflinks 0.346        

0 Strain