Gene : Medtr7g084020 M. truncatula Mt4.0v1
Defline:  (1 of 1) KOG2164 - Predicted E3 ubiquitin ligase Description:  RING finger protein
Genomic Order:  3841 Name:  ? Medtr7g084020
Secondary Identifier:  ? PAC:31081155
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g084020 0.5kb upstream 0.5kb upstream 6617 true chr7: 32370124-32376740 Medicago truncatula
Medtr7g084020 0.5kb upstream 0.5kb upstream 500 false chr7: 32376241-32376740 Medicago truncatula
Medtr7g084020 0.5kb downstream 0.5kb downstream 6617 true chr7: 32369624-32376240 Medicago truncatula
Medtr7g084020 0.5kb downstream 0.5kb downstream 500 false chr7: 32369624-32370123 Medicago truncatula
Medtr7g084020 1.0kb upstream 1.0kb upstream 7117 true chr7: 32370124-32377240 Medicago truncatula
Medtr7g084020 1.0kb upstream 1.0kb upstream 1000 false chr7: 32376241-32377240 Medicago truncatula
Medtr7g084020 1.0kb downstream 1.0kb downstream 7117 true chr7: 32369124-32376240 Medicago truncatula
Medtr7g084020 1.0kb downstream 1.0kb downstream 1000 false chr7: 32369124-32370123 Medicago truncatula
Medtr7g084020 2.0kb upstream 2.0kb upstream 8117 true chr7: 32370124-32378240 Medicago truncatula
Medtr7g084020 2.0kb upstream 2.0kb upstream 2000 false chr7: 32376241-32378240 Medicago truncatula
Medtr7g084020 2.0kb downstream 2.0kb downstream 8117 true chr7: 32368124-32376240 Medicago truncatula
Medtr7g084020 2.0kb downstream 2.0kb downstream 2000 false chr7: 32368124-32370123 Medicago truncatula
Medtr7g084020 5.0kb upstream 5.0kb upstream 11117 true chr7: 32370124-32381240 Medicago truncatula
Medtr7g084020 5.0kb upstream 5.0kb upstream 5000 false chr7: 32376241-32381240 Medicago truncatula
Medtr7g084020 5.0kb downstream 5.0kb downstream 11117 true chr7: 32365124-32376240 Medicago truncatula
Medtr7g084020 5.0kb downstream 5.0kb downstream 5000 false chr7: 32365124-32370123 Medicago truncatula
Medtr7g084020 10.0kb upstream 10.0kb upstream 16117 true chr7: 32370124-32386240 Medicago truncatula
Medtr7g084020 10.0kb upstream 10.0kb upstream 10000 false chr7: 32376241-32386240 Medicago truncatula
Medtr7g084020 10.0kb downstream 10.0kb downstream 16117 true chr7: 32360124-32376240 Medicago truncatula
Medtr7g084020 10.0kb downstream 10.0kb downstream 10000 false chr7: 32360124-32370123 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306700 5265 Fabidae View MSA
124060786 5270 Rosid View MSA
123742061 5271 Pentapetalae View MSA
122793495 5272 Eudicot View MSA
122042542 5273 Angiosperm View MSA
121344560 5274 Embryophyte View MSA
123423758 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.396     High  
cufflinks 10.388     High  
cufflinks 12.232     High  
cufflinks 3.699       Low
cufflinks 11.398     High  
cufflinks 4.993       Low
cufflinks 9.351        
cufflinks 9.458     High  
cufflinks 7.384        

0 Strain