Gene : Medtr7g084480 M. truncatula Mt4.0v1
Defline:  (1 of 1) 3.6.1.31 - Phosphoribosyl-ATP diphosphatase / Phosphoribosyladenosine triphosphate pyrophosphatase Description:  histidine biosynthesis hisIE protein
Genomic Order:  3870 Name:  ? Medtr7g084480
Secondary Identifier:  ? PAC:31077308
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula HISTSYN-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g084480 0.5kb upstream 0.5kb upstream 4913 true chr7: 32611400-32616312 Medicago truncatula
Medtr7g084480 0.5kb upstream 0.5kb upstream 500 false chr7: 32611400-32611899 Medicago truncatula
Medtr7g084480 0.5kb downstream 0.5kb downstream 4913 true chr7: 32611900-32616812 Medicago truncatula
Medtr7g084480 0.5kb downstream 0.5kb downstream 500 false chr7: 32616313-32616812 Medicago truncatula
Medtr7g084480 1.0kb upstream 1.0kb upstream 5413 true chr7: 32610900-32616312 Medicago truncatula
Medtr7g084480 1.0kb upstream 1.0kb upstream 1000 false chr7: 32610900-32611899 Medicago truncatula
Medtr7g084480 1.0kb downstream 1.0kb downstream 5413 true chr7: 32611900-32617312 Medicago truncatula
Medtr7g084480 1.0kb downstream 1.0kb downstream 1000 false chr7: 32616313-32617312 Medicago truncatula
Medtr7g084480 2.0kb upstream 2.0kb upstream 6413 true chr7: 32609900-32616312 Medicago truncatula
Medtr7g084480 2.0kb upstream 2.0kb upstream 2000 false chr7: 32609900-32611899 Medicago truncatula
Medtr7g084480 2.0kb downstream 2.0kb downstream 6413 true chr7: 32611900-32618312 Medicago truncatula
Medtr7g084480 2.0kb downstream 2.0kb downstream 2000 false chr7: 32616313-32618312 Medicago truncatula
Medtr7g084480 5.0kb upstream 5.0kb upstream 9413 true chr7: 32606900-32616312 Medicago truncatula
Medtr7g084480 5.0kb upstream 5.0kb upstream 5000 false chr7: 32606900-32611899 Medicago truncatula
Medtr7g084480 5.0kb downstream 5.0kb downstream 9413 true chr7: 32611900-32621312 Medicago truncatula
Medtr7g084480 5.0kb downstream 5.0kb downstream 5000 false chr7: 32616313-32621312 Medicago truncatula
Medtr7g084480 10.0kb upstream 10.0kb upstream 14413 true chr7: 32601900-32616312 Medicago truncatula
Medtr7g084480 10.0kb upstream 10.0kb upstream 10000 false chr7: 32601900-32611899 Medicago truncatula
Medtr7g084480 10.0kb downstream 10.0kb downstream 14413 true chr7: 32611900-32626312 Medicago truncatula
Medtr7g084480 10.0kb downstream 10.0kb downstream 10000 false chr7: 32616313-32626312 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304181 5265 Fabidae View MSA
124060953 5270 Rosid View MSA
123746626 5271 Pentapetalae View MSA
122789417 5272 Eudicot View MSA
122047358 5273 Angiosperm View MSA
121345826 5274 Embryophyte View MSA
123423910 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.69        
cufflinks 0.874        
cufflinks 1.021        
cufflinks 0.566        
cufflinks 2.287       High
cufflinks 0.18       Low
cufflinks 0.709        
cufflinks 0.754        
cufflinks 1.041        

0 Strain