Gene : Medtr7g085450 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10333 - INHIBITOR OF GROWTH PROTEIN Description:  PHD finger-like protein
Genomic Order:  3941 Name:  ? Medtr7g085450
Secondary Identifier:  ? PAC:31083533
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g085450 0.5kb upstream 0.5kb upstream 3158 true chr7: 33105530-33108687 Medicago truncatula
Medtr7g085450 0.5kb upstream 0.5kb upstream 500 false chr7: 33105530-33106029 Medicago truncatula
Medtr7g085450 0.5kb downstream 0.5kb downstream 3158 true chr7: 33106030-33109187 Medicago truncatula
Medtr7g085450 0.5kb downstream 0.5kb downstream 500 false chr7: 33108688-33109187 Medicago truncatula
Medtr7g085450 1.0kb upstream 1.0kb upstream 3658 true chr7: 33105030-33108687 Medicago truncatula
Medtr7g085450 1.0kb upstream 1.0kb upstream 1000 false chr7: 33105030-33106029 Medicago truncatula
Medtr7g085450 1.0kb downstream 1.0kb downstream 3658 true chr7: 33106030-33109687 Medicago truncatula
Medtr7g085450 1.0kb downstream 1.0kb downstream 1000 false chr7: 33108688-33109687 Medicago truncatula
Medtr7g085450 2.0kb upstream 2.0kb upstream 4658 true chr7: 33104030-33108687 Medicago truncatula
Medtr7g085450 2.0kb upstream 2.0kb upstream 2000 false chr7: 33104030-33106029 Medicago truncatula
Medtr7g085450 2.0kb downstream 2.0kb downstream 4658 true chr7: 33106030-33110687 Medicago truncatula
Medtr7g085450 2.0kb downstream 2.0kb downstream 2000 false chr7: 33108688-33110687 Medicago truncatula
Medtr7g085450 5.0kb upstream 5.0kb upstream 7658 true chr7: 33101030-33108687 Medicago truncatula
Medtr7g085450 5.0kb upstream 5.0kb upstream 5000 false chr7: 33101030-33106029 Medicago truncatula
Medtr7g085450 5.0kb downstream 5.0kb downstream 7658 true chr7: 33106030-33113687 Medicago truncatula
Medtr7g085450 5.0kb downstream 5.0kb downstream 5000 false chr7: 33108688-33113687 Medicago truncatula
Medtr7g085450 10.0kb upstream 10.0kb upstream 12658 true chr7: 33096030-33108687 Medicago truncatula
Medtr7g085450 10.0kb upstream 10.0kb upstream 10000 false chr7: 33096030-33106029 Medicago truncatula
Medtr7g085450 10.0kb downstream 10.0kb downstream 12658 true chr7: 33106030-33118687 Medicago truncatula
Medtr7g085450 10.0kb downstream 10.0kb downstream 10000 false chr7: 33108688-33118687 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307539 5265 Fabidae View MSA
124062837 5270 Rosid View MSA
123737861 5271 Pentapetalae View MSA
122787815 5272 Eudicot View MSA
122043468 5273 Angiosperm View MSA
121347114 5274 Embryophyte View MSA
123426604 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.123     High  
cufflinks 8.848        
cufflinks 8.449        
cufflinks 14.515     High High
cufflinks 8.766        
cufflinks 8.513        
cufflinks 13.29     High High
cufflinks 8.076       Low
cufflinks 11.059     High  

0 Strain