Gene : Medtr7g087450 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR12460 - CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN Description:  RNA polymerase II-binding domain protein
Genomic Order:  4076 Name:  ? Medtr7g087450
Secondary Identifier:  ? PAC:31078795
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g087450 0.5kb upstream 0.5kb upstream 8589 true chr7: 34026117-34034705 Medicago truncatula
Medtr7g087450 0.5kb upstream 0.5kb upstream 500 false chr7: 34034206-34034705 Medicago truncatula
Medtr7g087450 0.5kb downstream 0.5kb downstream 8589 true chr7: 34025617-34034205 Medicago truncatula
Medtr7g087450 0.5kb downstream 0.5kb downstream 500 false chr7: 34025617-34026116 Medicago truncatula
Medtr7g087450 1.0kb upstream 1.0kb upstream 9089 true chr7: 34026117-34035205 Medicago truncatula
Medtr7g087450 1.0kb upstream 1.0kb upstream 1000 false chr7: 34034206-34035205 Medicago truncatula
Medtr7g087450 1.0kb downstream 1.0kb downstream 9089 true chr7: 34025117-34034205 Medicago truncatula
Medtr7g087450 1.0kb downstream 1.0kb downstream 1000 false chr7: 34025117-34026116 Medicago truncatula
Medtr7g087450 2.0kb upstream 2.0kb upstream 10089 true chr7: 34026117-34036205 Medicago truncatula
Medtr7g087450 2.0kb upstream 2.0kb upstream 2000 false chr7: 34034206-34036205 Medicago truncatula
Medtr7g087450 2.0kb downstream 2.0kb downstream 10089 true chr7: 34024117-34034205 Medicago truncatula
Medtr7g087450 2.0kb downstream 2.0kb downstream 2000 false chr7: 34024117-34026116 Medicago truncatula
Medtr7g087450 5.0kb upstream 5.0kb upstream 13089 true chr7: 34026117-34039205 Medicago truncatula
Medtr7g087450 5.0kb upstream 5.0kb upstream 5000 false chr7: 34034206-34039205 Medicago truncatula
Medtr7g087450 5.0kb downstream 5.0kb downstream 13089 true chr7: 34021117-34034205 Medicago truncatula
Medtr7g087450 5.0kb downstream 5.0kb downstream 5000 false chr7: 34021117-34026116 Medicago truncatula
Medtr7g087450 10.0kb upstream 10.0kb upstream 18089 true chr7: 34026117-34044205 Medicago truncatula
Medtr7g087450 10.0kb upstream 10.0kb upstream 10000 false chr7: 34034206-34044205 Medicago truncatula
Medtr7g087450 10.0kb downstream 10.0kb downstream 18089 true chr7: 34016117-34034205 Medicago truncatula
Medtr7g087450 10.0kb downstream 10.0kb downstream 10000 false chr7: 34016117-34026116 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302415 5265 Fabidae View MSA
124070749 5270 Rosid View MSA
123742286 5271 Pentapetalae View MSA
122795416 5272 Eudicot View MSA
122049571 5273 Angiosperm View MSA
123428880 5275 Viridiplantae View MSA
121348039 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.051        
cufflinks 1.771        
cufflinks 2.54       High
cufflinks 1.007        
cufflinks 1.78        
cufflinks 0.56       Low
cufflinks 1.535        
cufflinks 2.146        
cufflinks 1.396        

0 Strain