Gene : Medtr7g087400 M. truncatula Mt4.0v1
Defline:  (1 of 6) PTHR11206:SF102 - MATE EFFLUX FAMILY PROTEIN Description:  MATE efflux family protein
Genomic Order:  4071 Name:  ? Medtr7g087400
Secondary Identifier:  ? PAC:31078440
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g087400 0.5kb upstream 0.5kb upstream 4626 true chr7: 33991800-33996425 Medicago truncatula
Medtr7g087400 0.5kb upstream 0.5kb upstream 500 false chr7: 33991800-33992299 Medicago truncatula
Medtr7g087400 0.5kb downstream 0.5kb downstream 4626 true chr7: 33992300-33996925 Medicago truncatula
Medtr7g087400 0.5kb downstream 0.5kb downstream 500 false chr7: 33996426-33996925 Medicago truncatula
Medtr7g087400 1.0kb upstream 1.0kb upstream 5126 true chr7: 33991300-33996425 Medicago truncatula
Medtr7g087400 1.0kb upstream 1.0kb upstream 1000 false chr7: 33991300-33992299 Medicago truncatula
Medtr7g087400 1.0kb downstream 1.0kb downstream 5126 true chr7: 33992300-33997425 Medicago truncatula
Medtr7g087400 1.0kb downstream 1.0kb downstream 1000 false chr7: 33996426-33997425 Medicago truncatula
Medtr7g087400 2.0kb upstream 2.0kb upstream 6126 true chr7: 33990300-33996425 Medicago truncatula
Medtr7g087400 2.0kb upstream 2.0kb upstream 2000 false chr7: 33990300-33992299 Medicago truncatula
Medtr7g087400 2.0kb downstream 2.0kb downstream 6126 true chr7: 33992300-33998425 Medicago truncatula
Medtr7g087400 2.0kb downstream 2.0kb downstream 2000 false chr7: 33996426-33998425 Medicago truncatula
Medtr7g087400 5.0kb upstream 5.0kb upstream 9126 true chr7: 33987300-33996425 Medicago truncatula
Medtr7g087400 5.0kb upstream 5.0kb upstream 5000 false chr7: 33987300-33992299 Medicago truncatula
Medtr7g087400 5.0kb downstream 5.0kb downstream 9126 true chr7: 33992300-34001425 Medicago truncatula
Medtr7g087400 5.0kb downstream 5.0kb downstream 5000 false chr7: 33996426-34001425 Medicago truncatula
Medtr7g087400 10.0kb upstream 10.0kb upstream 14126 true chr7: 33982300-33996425 Medicago truncatula
Medtr7g087400 10.0kb upstream 10.0kb upstream 10000 false chr7: 33982300-33992299 Medicago truncatula
Medtr7g087400 10.0kb downstream 10.0kb downstream 14126 true chr7: 33992300-34006425 Medicago truncatula
Medtr7g087400 10.0kb downstream 10.0kb downstream 10000 false chr7: 33996426-34006425 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296909 5265 Fabidae View MSA
124066814 5270 Rosid View MSA
123744477 5271 Pentapetalae View MSA
122791192 5272 Eudicot View MSA
122050429 5273 Angiosperm View MSA
121311902 5274 Embryophyte View MSA
123349133 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.087       High
cufflinks 0.248        
cufflinks 0.606        
cufflinks 0.081        
cufflinks 0.325        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low Low
cufflinks 0.174        
cufflinks 0.12        

0 Strain