Gene : Medtr7g087370 M. truncatula Mt4.0v1
Defline:  (1 of 6) PTHR11206:SF102 - MATE EFFLUX FAMILY PROTEIN Description:  MATE efflux family protein
Genomic Order:  4070 Name:  ? Medtr7g087370
Secondary Identifier:  ? PAC:31082279
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g087370 0.5kb upstream 0.5kb upstream 4919 true chr7: 33982235-33987153 Medicago truncatula
Medtr7g087370 0.5kb upstream 0.5kb upstream 500 false chr7: 33982235-33982734 Medicago truncatula
Medtr7g087370 0.5kb downstream 0.5kb downstream 4919 true chr7: 33982735-33987653 Medicago truncatula
Medtr7g087370 0.5kb downstream 0.5kb downstream 500 false chr7: 33987154-33987653 Medicago truncatula
Medtr7g087370 1.0kb upstream 1.0kb upstream 5419 true chr7: 33981735-33987153 Medicago truncatula
Medtr7g087370 1.0kb upstream 1.0kb upstream 1000 false chr7: 33981735-33982734 Medicago truncatula
Medtr7g087370 1.0kb downstream 1.0kb downstream 5419 true chr7: 33982735-33988153 Medicago truncatula
Medtr7g087370 1.0kb downstream 1.0kb downstream 1000 false chr7: 33987154-33988153 Medicago truncatula
Medtr7g087370 2.0kb upstream 2.0kb upstream 6419 true chr7: 33980735-33987153 Medicago truncatula
Medtr7g087370 2.0kb upstream 2.0kb upstream 2000 false chr7: 33980735-33982734 Medicago truncatula
Medtr7g087370 2.0kb downstream 2.0kb downstream 6419 true chr7: 33982735-33989153 Medicago truncatula
Medtr7g087370 2.0kb downstream 2.0kb downstream 2000 false chr7: 33987154-33989153 Medicago truncatula
Medtr7g087370 5.0kb upstream 5.0kb upstream 9419 true chr7: 33977735-33987153 Medicago truncatula
Medtr7g087370 5.0kb upstream 5.0kb upstream 5000 false chr7: 33977735-33982734 Medicago truncatula
Medtr7g087370 5.0kb downstream 5.0kb downstream 9419 true chr7: 33982735-33992153 Medicago truncatula
Medtr7g087370 5.0kb downstream 5.0kb downstream 5000 false chr7: 33987154-33992153 Medicago truncatula
Medtr7g087370 10.0kb upstream 10.0kb upstream 14419 true chr7: 33972735-33987153 Medicago truncatula
Medtr7g087370 10.0kb upstream 10.0kb upstream 10000 false chr7: 33972735-33982734 Medicago truncatula
Medtr7g087370 10.0kb downstream 10.0kb downstream 14419 true chr7: 33982735-33997153 Medicago truncatula
Medtr7g087370 10.0kb downstream 10.0kb downstream 10000 false chr7: 33987154-33997153 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122316663 5265 Fabidae View MSA
124074534 5270 Rosid View MSA
123753109 5271 Pentapetalae View MSA
122797339 5272 Eudicot View MSA
122050809 5273 Angiosperm View MSA
121344541 5274 Embryophyte View MSA
123428088 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.005     Low  
cufflinks 0.011     Low  
cufflinks 0.002     Low Low
cufflinks 0.014     Low  
cufflinks 0.096       High
cufflinks 0.002     Low Low
cufflinks 0.041     Low High

0 Strain