Gene : Medtr7g088220 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR16201:SF34 - LYSOSOMAL AMINO ACID TRANSPORTER 1 Description:  PQ-loop protein/transmembrane family protein
Genomic Order:  4125 Name:  ? Medtr7g088220
Secondary Identifier:  ? PAC:31081517
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g088220 0.5kb upstream 0.5kb upstream 5317 true chr7: 34337617-34342933 Medicago truncatula
Medtr7g088220 0.5kb upstream 0.5kb upstream 500 false chr7: 34342434-34342933 Medicago truncatula
Medtr7g088220 0.5kb downstream 0.5kb downstream 5317 true chr7: 34337117-34342433 Medicago truncatula
Medtr7g088220 0.5kb downstream 0.5kb downstream 500 false chr7: 34337117-34337616 Medicago truncatula
Medtr7g088220 1.0kb upstream 1.0kb upstream 5817 true chr7: 34337617-34343433 Medicago truncatula
Medtr7g088220 1.0kb upstream 1.0kb upstream 1000 false chr7: 34342434-34343433 Medicago truncatula
Medtr7g088220 1.0kb downstream 1.0kb downstream 5817 true chr7: 34336617-34342433 Medicago truncatula
Medtr7g088220 1.0kb downstream 1.0kb downstream 1000 false chr7: 34336617-34337616 Medicago truncatula
Medtr7g088220 2.0kb upstream 2.0kb upstream 6817 true chr7: 34337617-34344433 Medicago truncatula
Medtr7g088220 2.0kb upstream 2.0kb upstream 2000 false chr7: 34342434-34344433 Medicago truncatula
Medtr7g088220 2.0kb downstream 2.0kb downstream 6817 true chr7: 34335617-34342433 Medicago truncatula
Medtr7g088220 2.0kb downstream 2.0kb downstream 2000 false chr7: 34335617-34337616 Medicago truncatula
Medtr7g088220 5.0kb upstream 5.0kb upstream 9817 true chr7: 34337617-34347433 Medicago truncatula
Medtr7g088220 5.0kb upstream 5.0kb upstream 5000 false chr7: 34342434-34347433 Medicago truncatula
Medtr7g088220 5.0kb downstream 5.0kb downstream 9817 true chr7: 34332617-34342433 Medicago truncatula
Medtr7g088220 5.0kb downstream 5.0kb downstream 5000 false chr7: 34332617-34337616 Medicago truncatula
Medtr7g088220 10.0kb upstream 10.0kb upstream 14817 true chr7: 34337617-34352433 Medicago truncatula
Medtr7g088220 10.0kb upstream 10.0kb upstream 10000 false chr7: 34342434-34352433 Medicago truncatula
Medtr7g088220 10.0kb downstream 10.0kb downstream 14817 true chr7: 34327617-34342433 Medicago truncatula
Medtr7g088220 10.0kb downstream 10.0kb downstream 10000 false chr7: 34327617-34337616 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302043 5265 Fabidae View MSA
124071732 5270 Rosid View MSA
123744314 5271 Pentapetalae View MSA
122789645 5272 Eudicot View MSA
122043599 5273 Angiosperm View MSA
121344706 5274 Embryophyte View MSA
123427265 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.006     Low  
cufflinks 0.069        
cufflinks 0.01     Low  
cufflinks 0.013     Low  
cufflinks 0.093       High
cufflinks 0.005     Low  
cufflinks 0.194       High

0 Strain