Gene : Medtr7g077860 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR34797:SF1 - EXPRESSED PROTEIN Description:  hypothetical protein
Genomic Order:  3397 Name:  ? Medtr7g077860
Secondary Identifier:  ? PAC:31079694
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g077860 0.5kb upstream 0.5kb upstream 3490 true chr7: 29411033-29414522 Medicago truncatula
Medtr7g077860 0.5kb upstream 0.5kb upstream 500 false chr7: 29414023-29414522 Medicago truncatula
Medtr7g077860 0.5kb downstream 0.5kb downstream 3490 true chr7: 29410533-29414022 Medicago truncatula
Medtr7g077860 0.5kb downstream 0.5kb downstream 500 false chr7: 29410533-29411032 Medicago truncatula
Medtr7g077860 1.0kb upstream 1.0kb upstream 3990 true chr7: 29411033-29415022 Medicago truncatula
Medtr7g077860 1.0kb upstream 1.0kb upstream 1000 false chr7: 29414023-29415022 Medicago truncatula
Medtr7g077860 1.0kb downstream 1.0kb downstream 3990 true chr7: 29410033-29414022 Medicago truncatula
Medtr7g077860 1.0kb downstream 1.0kb downstream 1000 false chr7: 29410033-29411032 Medicago truncatula
Medtr7g077860 2.0kb upstream 2.0kb upstream 4990 true chr7: 29411033-29416022 Medicago truncatula
Medtr7g077860 2.0kb upstream 2.0kb upstream 2000 false chr7: 29414023-29416022 Medicago truncatula
Medtr7g077860 2.0kb downstream 2.0kb downstream 4990 true chr7: 29409033-29414022 Medicago truncatula
Medtr7g077860 2.0kb downstream 2.0kb downstream 2000 false chr7: 29409033-29411032 Medicago truncatula
Medtr7g077860 5.0kb upstream 5.0kb upstream 7990 true chr7: 29411033-29419022 Medicago truncatula
Medtr7g077860 5.0kb upstream 5.0kb upstream 5000 false chr7: 29414023-29419022 Medicago truncatula
Medtr7g077860 5.0kb downstream 5.0kb downstream 7990 true chr7: 29406033-29414022 Medicago truncatula
Medtr7g077860 5.0kb downstream 5.0kb downstream 5000 false chr7: 29406033-29411032 Medicago truncatula
Medtr7g077860 10.0kb upstream 10.0kb upstream 12990 true chr7: 29411033-29424022 Medicago truncatula
Medtr7g077860 10.0kb upstream 10.0kb upstream 10000 false chr7: 29414023-29424022 Medicago truncatula
Medtr7g077860 10.0kb downstream 10.0kb downstream 12990 true chr7: 29401033-29414022 Medicago truncatula
Medtr7g077860 10.0kb downstream 10.0kb downstream 10000 false chr7: 29401033-29411032 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041192 5273 Angiosperm View MSA
122305504 5265 Fabidae View MSA
124069169 5270 Rosid View MSA
123746892 5271 Pentapetalae View MSA
122786328 5272 Eudicot View MSA
121349557 5274 Embryophyte View MSA
123381356 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.016     High  
cufflinks 22.707     High  
cufflinks 41.607     High High
cufflinks 18.214     High  
cufflinks 20.438     High  
cufflinks 12.326     High Low
cufflinks 27.494     High  
cufflinks 31.946     High High
cufflinks 13.349     High Low

0 Strain