Gene : Medtr7g077840 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12705 - ORIGIN RECOGNITION COMPLEX SUBUNIT 5 Description:  origin recognition complex subunit 5
Genomic Order:  3396 Name:  ? Medtr7g077840
Secondary Identifier:  ? PAC:31079605
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g077840 0.5kb upstream 0.5kb upstream 3746 true chr7: 29404118-29407863 Medicago truncatula
Medtr7g077840 0.5kb upstream 0.5kb upstream 500 false chr7: 29407364-29407863 Medicago truncatula
Medtr7g077840 0.5kb downstream 0.5kb downstream 3746 true chr7: 29403618-29407363 Medicago truncatula
Medtr7g077840 0.5kb downstream 0.5kb downstream 500 false chr7: 29403618-29404117 Medicago truncatula
Medtr7g077840 1.0kb upstream 1.0kb upstream 4246 true chr7: 29404118-29408363 Medicago truncatula
Medtr7g077840 1.0kb upstream 1.0kb upstream 1000 false chr7: 29407364-29408363 Medicago truncatula
Medtr7g077840 1.0kb downstream 1.0kb downstream 4246 true chr7: 29403118-29407363 Medicago truncatula
Medtr7g077840 1.0kb downstream 1.0kb downstream 1000 false chr7: 29403118-29404117 Medicago truncatula
Medtr7g077840 2.0kb upstream 2.0kb upstream 5246 true chr7: 29404118-29409363 Medicago truncatula
Medtr7g077840 2.0kb upstream 2.0kb upstream 2000 false chr7: 29407364-29409363 Medicago truncatula
Medtr7g077840 2.0kb downstream 2.0kb downstream 5246 true chr7: 29402118-29407363 Medicago truncatula
Medtr7g077840 2.0kb downstream 2.0kb downstream 2000 false chr7: 29402118-29404117 Medicago truncatula
Medtr7g077840 5.0kb upstream 5.0kb upstream 8246 true chr7: 29404118-29412363 Medicago truncatula
Medtr7g077840 5.0kb upstream 5.0kb upstream 5000 false chr7: 29407364-29412363 Medicago truncatula
Medtr7g077840 5.0kb downstream 5.0kb downstream 8246 true chr7: 29399118-29407363 Medicago truncatula
Medtr7g077840 5.0kb downstream 5.0kb downstream 5000 false chr7: 29399118-29404117 Medicago truncatula
Medtr7g077840 10.0kb upstream 10.0kb upstream 13246 true chr7: 29404118-29417363 Medicago truncatula
Medtr7g077840 10.0kb upstream 10.0kb upstream 10000 false chr7: 29407364-29417363 Medicago truncatula
Medtr7g077840 10.0kb downstream 10.0kb downstream 13246 true chr7: 29394118-29407363 Medicago truncatula
Medtr7g077840 10.0kb downstream 10.0kb downstream 10000 false chr7: 29394118-29404117 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308121 5265 Fabidae View MSA
124063639 5270 Rosid View MSA
123738989 5271 Pentapetalae View MSA
122792366 5272 Eudicot View MSA
122046097 5273 Angiosperm View MSA
121344554 5274 Embryophyte View MSA
123425220 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.602       High
cufflinks 2.028        
cufflinks 2.715        
cufflinks 2.051        
cufflinks 2.683        
cufflinks 1.152       Low
cufflinks 3.928       High
cufflinks 2.139        
cufflinks 3.41        

0 Strain