Gene : Medtr7g078090 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10799:SF577 - PROTEIN TAF-3, ISOFORM A Description:  ATP-dependent helicase BRM
Genomic Order:  3414 Name:  ? Medtr7g078090
Secondary Identifier:  ? PAC:31078512
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g078090 0.5kb upstream 0.5kb upstream 12045 true chr7: 29512985-29525029 Medicago truncatula
Medtr7g078090 0.5kb upstream 0.5kb upstream 500 false chr7: 29512985-29513484 Medicago truncatula
Medtr7g078090 0.5kb downstream 0.5kb downstream 12045 true chr7: 29513485-29525529 Medicago truncatula
Medtr7g078090 0.5kb downstream 0.5kb downstream 500 false chr7: 29525030-29525529 Medicago truncatula
Medtr7g078090 1.0kb upstream 1.0kb upstream 12545 true chr7: 29512485-29525029 Medicago truncatula
Medtr7g078090 1.0kb upstream 1.0kb upstream 1000 false chr7: 29512485-29513484 Medicago truncatula
Medtr7g078090 1.0kb downstream 1.0kb downstream 12545 true chr7: 29513485-29526029 Medicago truncatula
Medtr7g078090 1.0kb downstream 1.0kb downstream 1000 false chr7: 29525030-29526029 Medicago truncatula
Medtr7g078090 2.0kb upstream 2.0kb upstream 13545 true chr7: 29511485-29525029 Medicago truncatula
Medtr7g078090 2.0kb upstream 2.0kb upstream 2000 false chr7: 29511485-29513484 Medicago truncatula
Medtr7g078090 2.0kb downstream 2.0kb downstream 13545 true chr7: 29513485-29527029 Medicago truncatula
Medtr7g078090 2.0kb downstream 2.0kb downstream 2000 false chr7: 29525030-29527029 Medicago truncatula
Medtr7g078090 5.0kb upstream 5.0kb upstream 16545 true chr7: 29508485-29525029 Medicago truncatula
Medtr7g078090 5.0kb upstream 5.0kb upstream 5000 false chr7: 29508485-29513484 Medicago truncatula
Medtr7g078090 5.0kb downstream 5.0kb downstream 16545 true chr7: 29513485-29530029 Medicago truncatula
Medtr7g078090 5.0kb downstream 5.0kb downstream 5000 false chr7: 29525030-29530029 Medicago truncatula
Medtr7g078090 10.0kb upstream 10.0kb upstream 21545 true chr7: 29503485-29525029 Medicago truncatula
Medtr7g078090 10.0kb upstream 10.0kb upstream 10000 false chr7: 29503485-29513484 Medicago truncatula
Medtr7g078090 10.0kb downstream 10.0kb downstream 21545 true chr7: 29513485-29535029 Medicago truncatula
Medtr7g078090 10.0kb downstream 10.0kb downstream 10000 false chr7: 29525030-29535029 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121656128 5273 Angiosperm View MSA
122297518 5265 Fabidae View MSA
124036054 5270 Rosid View MSA
123609466 5271 Pentapetalae View MSA
122644114 5272 Eudicot View MSA
121349128 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.308        
cufflinks 2.608        
cufflinks 2.788        
cufflinks 0.449       Low
cufflinks 4.224       High
cufflinks 0.816        
cufflinks 1.153        
cufflinks 2.317        
cufflinks 1.099        

0 Strain