Gene : Medtr7g079520 M. truncatula Mt4.0v1

Defline:  (1 of 1) PTHR10293:SF37 - MONOTHIOL GLUTAREDOXIN-S14, CHLOROPLASTIC Description:  Grx4 family monothiol glutaredoxin
Genomic Order:  3521 Name:  ? Medtr7g079520
Secondary Identifier:  ? PAC:31077179

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula THIOREDOX-PWY Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g079520 0.5kb upstream 0.5kb upstream 2856 true chr7: 30198937-30201792 Medicago truncatula
Medtr7g079520 0.5kb upstream 0.5kb upstream 500 false chr7: 30201293-30201792 Medicago truncatula
Medtr7g079520 0.5kb downstream 0.5kb downstream 2856 true chr7: 30198437-30201292 Medicago truncatula
Medtr7g079520 0.5kb downstream 0.5kb downstream 500 false chr7: 30198437-30198936 Medicago truncatula
Medtr7g079520 1.0kb upstream 1.0kb upstream 3356 true chr7: 30198937-30202292 Medicago truncatula
Medtr7g079520 1.0kb upstream 1.0kb upstream 1000 false chr7: 30201293-30202292 Medicago truncatula
Medtr7g079520 1.0kb downstream 1.0kb downstream 3356 true chr7: 30197937-30201292 Medicago truncatula
Medtr7g079520 1.0kb downstream 1.0kb downstream 1000 false chr7: 30197937-30198936 Medicago truncatula
Medtr7g079520 2.0kb upstream 2.0kb upstream 4356 true chr7: 30198937-30203292 Medicago truncatula
Medtr7g079520 2.0kb upstream 2.0kb upstream 2000 false chr7: 30201293-30203292 Medicago truncatula
Medtr7g079520 2.0kb downstream 2.0kb downstream 4356 true chr7: 30196937-30201292 Medicago truncatula
Medtr7g079520 2.0kb downstream 2.0kb downstream 2000 false chr7: 30196937-30198936 Medicago truncatula
Medtr7g079520 5.0kb upstream 5.0kb upstream 7356 true chr7: 30198937-30206292 Medicago truncatula
Medtr7g079520 5.0kb upstream 5.0kb upstream 5000 false chr7: 30201293-30206292 Medicago truncatula
Medtr7g079520 5.0kb downstream 5.0kb downstream 7356 true chr7: 30193937-30201292 Medicago truncatula
Medtr7g079520 5.0kb downstream 5.0kb downstream 5000 false chr7: 30193937-30198936 Medicago truncatula
Medtr7g079520 10.0kb upstream 10.0kb upstream 12356 true chr7: 30198937-30211292 Medicago truncatula
Medtr7g079520 10.0kb upstream 10.0kb upstream 10000 false chr7: 30201293-30211292 Medicago truncatula
Medtr7g079520 10.0kb downstream 10.0kb downstream 12356 true chr7: 30188937-30201292 Medicago truncatula
Medtr7g079520 10.0kb downstream 10.0kb downstream 10000 false chr7: 30188937-30198936 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310199 5265 Fabidae View MSA
124074597 5270 Rosid View MSA
123743063 5271 Pentapetalae View MSA
122787324 5272 Eudicot View MSA
122043030 5273 Angiosperm View MSA
121347328 5274 Embryophyte View MSA
123424474 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.977        
cufflinks 13.973     High  
cufflinks 12.944     High  
cufflinks 2.708        
cufflinks 19.556     High High
cufflinks 1.33       Low
cufflinks 2.234        
cufflinks 13.743     High  
cufflinks 2.599        

0 Strain