Gene : Medtr7g079080 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR11751:SF284 - 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE-LIKE PROTEIN 1 Description:  1-aminocyclopropane-1-carboxylate synthase
Genomic Order:  3487 Name:  ? Medtr7g079080
Secondary Identifier:  ? PAC:31082593
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula ETHYL-PWY Medicago truncatula pathologic  
Mtruncatula PWY-7270 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g079080 0.5kb upstream 0.5kb upstream 4036 true chr7: 29963156-29967191 Medicago truncatula
Medtr7g079080 0.5kb upstream 0.5kb upstream 500 false chr7: 29966692-29967191 Medicago truncatula
Medtr7g079080 0.5kb downstream 0.5kb downstream 4036 true chr7: 29962656-29966691 Medicago truncatula
Medtr7g079080 0.5kb downstream 0.5kb downstream 500 false chr7: 29962656-29963155 Medicago truncatula
Medtr7g079080 1.0kb upstream 1.0kb upstream 4536 true chr7: 29963156-29967691 Medicago truncatula
Medtr7g079080 1.0kb upstream 1.0kb upstream 1000 false chr7: 29966692-29967691 Medicago truncatula
Medtr7g079080 1.0kb downstream 1.0kb downstream 4536 true chr7: 29962156-29966691 Medicago truncatula
Medtr7g079080 1.0kb downstream 1.0kb downstream 1000 false chr7: 29962156-29963155 Medicago truncatula
Medtr7g079080 2.0kb upstream 2.0kb upstream 5536 true chr7: 29963156-29968691 Medicago truncatula
Medtr7g079080 2.0kb upstream 2.0kb upstream 2000 false chr7: 29966692-29968691 Medicago truncatula
Medtr7g079080 2.0kb downstream 2.0kb downstream 5536 true chr7: 29961156-29966691 Medicago truncatula
Medtr7g079080 2.0kb downstream 2.0kb downstream 2000 false chr7: 29961156-29963155 Medicago truncatula
Medtr7g079080 5.0kb upstream 5.0kb upstream 8536 true chr7: 29963156-29971691 Medicago truncatula
Medtr7g079080 5.0kb upstream 5.0kb upstream 5000 false chr7: 29966692-29971691 Medicago truncatula
Medtr7g079080 5.0kb downstream 5.0kb downstream 8536 true chr7: 29958156-29966691 Medicago truncatula
Medtr7g079080 5.0kb downstream 5.0kb downstream 5000 false chr7: 29958156-29963155 Medicago truncatula
Medtr7g079080 10.0kb upstream 10.0kb upstream 13536 true chr7: 29963156-29976691 Medicago truncatula
Medtr7g079080 10.0kb upstream 10.0kb upstream 10000 false chr7: 29966692-29976691 Medicago truncatula
Medtr7g079080 10.0kb downstream 10.0kb downstream 13536 true chr7: 29953156-29966691 Medicago truncatula
Medtr7g079080 10.0kb downstream 10.0kb downstream 10000 false chr7: 29953156-29963155 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302785 5265 Fabidae View MSA
124064739 5270 Rosid View MSA
123742797 5271 Pentapetalae View MSA
122787155 5272 Eudicot View MSA
122050094 5273 Angiosperm View MSA
121311735 5274 Embryophyte View MSA
123428176 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.011        
cufflinks 0.417       Low
cufflinks 1.885        
cufflinks 3.156        
cufflinks 0.751       Low
cufflinks 9.565       High
cufflinks 13.338     High High
cufflinks 0.725       Low
cufflinks 5.07        

0 Strain