Gene : Medtr7g080020 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR31221:SF1 - WRKY TRANSCRIPTION FACTOR 1-RELATED Description:  WRKY family transcription factor
Genomic Order:  3551 Name:  ? Medtr7g080020
Secondary Identifier:  ? PAC:31083549
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g080020 0.5kb upstream 0.5kb upstream 4918 true chr7: 30407108-30412025 Medicago truncatula
Medtr7g080020 0.5kb upstream 0.5kb upstream 500 false chr7: 30411526-30412025 Medicago truncatula
Medtr7g080020 0.5kb downstream 0.5kb downstream 4918 true chr7: 30406608-30411525 Medicago truncatula
Medtr7g080020 0.5kb downstream 0.5kb downstream 500 false chr7: 30406608-30407107 Medicago truncatula
Medtr7g080020 1.0kb upstream 1.0kb upstream 5418 true chr7: 30407108-30412525 Medicago truncatula
Medtr7g080020 1.0kb upstream 1.0kb upstream 1000 false chr7: 30411526-30412525 Medicago truncatula
Medtr7g080020 1.0kb downstream 1.0kb downstream 5418 true chr7: 30406108-30411525 Medicago truncatula
Medtr7g080020 1.0kb downstream 1.0kb downstream 1000 false chr7: 30406108-30407107 Medicago truncatula
Medtr7g080020 2.0kb upstream 2.0kb upstream 6418 true chr7: 30407108-30413525 Medicago truncatula
Medtr7g080020 2.0kb upstream 2.0kb upstream 2000 false chr7: 30411526-30413525 Medicago truncatula
Medtr7g080020 2.0kb downstream 2.0kb downstream 6418 true chr7: 30405108-30411525 Medicago truncatula
Medtr7g080020 2.0kb downstream 2.0kb downstream 2000 false chr7: 30405108-30407107 Medicago truncatula
Medtr7g080020 5.0kb upstream 5.0kb upstream 9418 true chr7: 30407108-30416525 Medicago truncatula
Medtr7g080020 5.0kb upstream 5.0kb upstream 5000 false chr7: 30411526-30416525 Medicago truncatula
Medtr7g080020 5.0kb downstream 5.0kb downstream 9418 true chr7: 30402108-30411525 Medicago truncatula
Medtr7g080020 5.0kb downstream 5.0kb downstream 5000 false chr7: 30402108-30407107 Medicago truncatula
Medtr7g080020 10.0kb upstream 10.0kb upstream 14418 true chr7: 30407108-30421525 Medicago truncatula
Medtr7g080020 10.0kb upstream 10.0kb upstream 10000 false chr7: 30411526-30421525 Medicago truncatula
Medtr7g080020 10.0kb downstream 10.0kb downstream 14418 true chr7: 30397108-30411525 Medicago truncatula
Medtr7g080020 10.0kb downstream 10.0kb downstream 10000 false chr7: 30397108-30407107 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306023 5265 Fabidae View MSA
124070973 5270 Rosid View MSA
123750949 5271 Pentapetalae View MSA
122792331 5272 Eudicot View MSA
122049483 5273 Angiosperm View MSA
121349380 5274 Embryophyte View MSA
123428268 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.074        
cufflinks 0.04     Low  
cufflinks 0.086        
cufflinks 0.043     Low  
cufflinks 0.115       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.02     Low Low
cufflinks 0.072        
cufflinks 0.07     Low  

0 Strain