Gene : Medtr7g079840 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12506//PTHR12506:SF21 - PROTEIN PHOSPHATASE RELATED Description:  zinc finger CCCH domain protein
Genomic Order:  3541 Name:  ? Medtr7g079840
Secondary Identifier:  ? PAC:31084016
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g079840 0.5kb upstream 0.5kb upstream 7754 true chr7: 30324378-30332131 Medicago truncatula
Medtr7g079840 0.5kb upstream 0.5kb upstream 500 false chr7: 30331632-30332131 Medicago truncatula
Medtr7g079840 0.5kb downstream 0.5kb downstream 7754 true chr7: 30323878-30331631 Medicago truncatula
Medtr7g079840 0.5kb downstream 0.5kb downstream 500 false chr7: 30323878-30324377 Medicago truncatula
Medtr7g079840 1.0kb upstream 1.0kb upstream 8254 true chr7: 30324378-30332631 Medicago truncatula
Medtr7g079840 1.0kb upstream 1.0kb upstream 1000 false chr7: 30331632-30332631 Medicago truncatula
Medtr7g079840 1.0kb downstream 1.0kb downstream 8254 true chr7: 30323378-30331631 Medicago truncatula
Medtr7g079840 1.0kb downstream 1.0kb downstream 1000 false chr7: 30323378-30324377 Medicago truncatula
Medtr7g079840 2.0kb upstream 2.0kb upstream 9254 true chr7: 30324378-30333631 Medicago truncatula
Medtr7g079840 2.0kb upstream 2.0kb upstream 2000 false chr7: 30331632-30333631 Medicago truncatula
Medtr7g079840 2.0kb downstream 2.0kb downstream 9254 true chr7: 30322378-30331631 Medicago truncatula
Medtr7g079840 2.0kb downstream 2.0kb downstream 2000 false chr7: 30322378-30324377 Medicago truncatula
Medtr7g079840 5.0kb upstream 5.0kb upstream 12254 true chr7: 30324378-30336631 Medicago truncatula
Medtr7g079840 5.0kb upstream 5.0kb upstream 5000 false chr7: 30331632-30336631 Medicago truncatula
Medtr7g079840 5.0kb downstream 5.0kb downstream 12254 true chr7: 30319378-30331631 Medicago truncatula
Medtr7g079840 5.0kb downstream 5.0kb downstream 5000 false chr7: 30319378-30324377 Medicago truncatula
Medtr7g079840 10.0kb upstream 10.0kb upstream 17254 true chr7: 30324378-30341631 Medicago truncatula
Medtr7g079840 10.0kb upstream 10.0kb upstream 10000 false chr7: 30331632-30341631 Medicago truncatula
Medtr7g079840 10.0kb downstream 10.0kb downstream 17254 true chr7: 30314378-30331631 Medicago truncatula
Medtr7g079840 10.0kb downstream 10.0kb downstream 10000 false chr7: 30314378-30324377 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301689 5265 Fabidae View MSA
124062485 5270 Rosid View MSA
123742436 5271 Pentapetalae View MSA
122788272 5272 Eudicot View MSA
122047416 5273 Angiosperm View MSA
121348027 5274 Embryophyte View MSA
123428726 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.154        
cufflinks 2.873        
cufflinks 3.28       High
cufflinks 1.848        
cufflinks 3.012        
cufflinks 1.192       Low
cufflinks 2.262        
cufflinks 3.198        
cufflinks 2.076        

0 Strain