Gene : Medtr7g097070 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10694//PTHR10694:SF53 - JUMONJI DOMAIN CONTAINING PROTEIN Description:  transcription factor jumonji family protein
Genomic Order:  4769 Name:  ? Medtr7g097070
Secondary Identifier:  ? PAC:31078244
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g097070 0.5kb upstream 0.5kb upstream 7691 true chr7: 38999118-39006808 Medicago truncatula
Medtr7g097070 0.5kb upstream 0.5kb upstream 500 false chr7: 39006309-39006808 Medicago truncatula
Medtr7g097070 0.5kb downstream 0.5kb downstream 7691 true chr7: 38998618-39006308 Medicago truncatula
Medtr7g097070 0.5kb downstream 0.5kb downstream 500 false chr7: 38998618-38999117 Medicago truncatula
Medtr7g097070 1.0kb upstream 1.0kb upstream 8191 true chr7: 38999118-39007308 Medicago truncatula
Medtr7g097070 1.0kb upstream 1.0kb upstream 1000 false chr7: 39006309-39007308 Medicago truncatula
Medtr7g097070 1.0kb downstream 1.0kb downstream 8191 true chr7: 38998118-39006308 Medicago truncatula
Medtr7g097070 1.0kb downstream 1.0kb downstream 1000 false chr7: 38998118-38999117 Medicago truncatula
Medtr7g097070 2.0kb upstream 2.0kb upstream 9191 true chr7: 38999118-39008308 Medicago truncatula
Medtr7g097070 2.0kb upstream 2.0kb upstream 2000 false chr7: 39006309-39008308 Medicago truncatula
Medtr7g097070 2.0kb downstream 2.0kb downstream 9191 true chr7: 38997118-39006308 Medicago truncatula
Medtr7g097070 2.0kb downstream 2.0kb downstream 2000 false chr7: 38997118-38999117 Medicago truncatula
Medtr7g097070 5.0kb upstream 5.0kb upstream 12191 true chr7: 38999118-39011308 Medicago truncatula
Medtr7g097070 5.0kb upstream 5.0kb upstream 5000 false chr7: 39006309-39011308 Medicago truncatula
Medtr7g097070 5.0kb downstream 5.0kb downstream 12191 true chr7: 38994118-39006308 Medicago truncatula
Medtr7g097070 5.0kb downstream 5.0kb downstream 5000 false chr7: 38994118-38999117 Medicago truncatula
Medtr7g097070 10.0kb upstream 10.0kb upstream 17191 true chr7: 38999118-39016308 Medicago truncatula
Medtr7g097070 10.0kb upstream 10.0kb upstream 10000 false chr7: 39006309-39016308 Medicago truncatula
Medtr7g097070 10.0kb downstream 10.0kb downstream 17191 true chr7: 38989118-39006308 Medicago truncatula
Medtr7g097070 10.0kb downstream 10.0kb downstream 10000 false chr7: 38989118-38999117 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309288 5265 Fabidae View MSA
124069719 5270 Rosid View MSA
123751211 5271 Pentapetalae View MSA
122797514 5272 Eudicot View MSA
122050637 5273 Angiosperm View MSA
123428928 5275 Viridiplantae View MSA
121350129 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.991        
cufflinks 1.692        
cufflinks 1.622        
cufflinks 0.546       Low
cufflinks 2.335       High
cufflinks 0.988        
cufflinks 0.897        
cufflinks 1.39        
cufflinks 1.215        

0 Strain